| Full name: zinc finger BED-type containing 3 | Alias Symbol: MGC15435 | ||
| Type: protein-coding gene | Cytoband: 5q13.3 | ||
| Entrez ID: 84327 | HGNC ID: HGNC:20711 | Ensembl Gene: ENSG00000132846 | OMIM ID: 615250 |
| Drug and gene relationship at DGIdb | |||
Expression of ZBED3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZBED3 | 84327 | 228402_at | -0.0781 | 0.9074 | |
| GSE26886 | ZBED3 | 84327 | 235109_at | 0.3830 | 0.2111 | |
| GSE45670 | ZBED3 | 84327 | 235109_at | -0.8632 | 0.0004 | |
| GSE53622 | ZBED3 | 84327 | 67719 | -0.4485 | 0.0001 | |
| GSE53624 | ZBED3 | 84327 | 67719 | -0.3477 | 0.0000 | |
| GSE63941 | ZBED3 | 84327 | 228402_at | 1.2478 | 0.0605 | |
| GSE77861 | ZBED3 | 84327 | 228402_at | 0.0897 | 0.7303 | |
| GSE97050 | ZBED3 | 84327 | A_23_P93032 | -0.3972 | 0.2926 | |
| SRP007169 | ZBED3 | 84327 | RNAseq | 0.5409 | 0.3286 | |
| SRP008496 | ZBED3 | 84327 | RNAseq | 1.7047 | 0.0003 | |
| SRP064894 | ZBED3 | 84327 | RNAseq | -0.0120 | 0.9564 | |
| SRP133303 | ZBED3 | 84327 | RNAseq | -0.0493 | 0.7023 | |
| SRP159526 | ZBED3 | 84327 | RNAseq | 0.1113 | 0.7671 | |
| SRP193095 | ZBED3 | 84327 | RNAseq | 0.1478 | 0.2899 | |
| SRP219564 | ZBED3 | 84327 | RNAseq | -0.0048 | 0.9911 | |
| TCGA | ZBED3 | 84327 | RNAseq | -1.0395 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by ZBED3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ZBED3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZBED3 | 84327 | 1 | 13 | 16 | |
| GSE20123 | ZBED3 | 84327 | 1 | 13 | 16 | |
| GSE43470 | ZBED3 | 84327 | 1 | 13 | 29 | |
| GSE46452 | ZBED3 | 84327 | 0 | 28 | 31 | |
| GSE47630 | ZBED3 | 84327 | 1 | 19 | 20 | |
| GSE54993 | ZBED3 | 84327 | 8 | 1 | 61 | |
| GSE54994 | ZBED3 | 84327 | 1 | 19 | 33 | |
| GSE60625 | ZBED3 | 84327 | 0 | 0 | 11 | |
| GSE74703 | ZBED3 | 84327 | 1 | 9 | 26 | |
| GSE74704 | ZBED3 | 84327 | 1 | 6 | 13 | |
| TCGA | ZBED3 | 84327 | 5 | 49 | 42 |
Total number of gains: 20; Total number of losses: 170; Total Number of normals: 298.
Somatic mutations of ZBED3:
Generating mutation plots.
Highly correlated genes for ZBED3:
Showing top 20/222 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZBED3 | FXYD1 | 0.757019 | 3 | 0 | 3 |
| ZBED3 | CORO6 | 0.685149 | 3 | 0 | 3 |
| ZBED3 | ZBTB39 | 0.674751 | 3 | 0 | 3 |
| ZBED3 | MICAL3 | 0.663665 | 3 | 0 | 3 |
| ZBED3 | SALL2 | 0.660595 | 3 | 0 | 3 |
| ZBED3 | FAM71E1 | 0.651947 | 3 | 0 | 3 |
| ZBED3 | ZNF483 | 0.65061 | 3 | 0 | 3 |
| ZBED3 | ANKS1B | 0.645698 | 4 | 0 | 4 |
| ZBED3 | C11orf95 | 0.642962 | 3 | 0 | 3 |
| ZBED3 | SLC22A17 | 0.64175 | 4 | 0 | 3 |
| ZBED3 | VAMP2 | 0.63731 | 5 | 0 | 3 |
| ZBED3 | ITPK1-AS1 | 0.634864 | 3 | 0 | 3 |
| ZBED3 | SIRT1 | 0.634488 | 3 | 0 | 3 |
| ZBED3 | NUDT17 | 0.634049 | 4 | 0 | 3 |
| ZBED3 | RBM42 | 0.633029 | 3 | 0 | 3 |
| ZBED3 | RANBP3L | 0.631616 | 3 | 0 | 3 |
| ZBED3 | GABBR1 | 0.630731 | 3 | 0 | 3 |
| ZBED3 | MYEF2 | 0.627188 | 4 | 0 | 3 |
| ZBED3 | ZNF581 | 0.622202 | 3 | 0 | 3 |
| ZBED3 | AATK | 0.619701 | 4 | 0 | 3 |
For details and further investigation, click here
