| Full name: spalt like transcription factor 2 | Alias Symbol: KIAA0360|Hsal2|ZNF795 | ||
| Type: protein-coding gene | Cytoband: 14q11.2 | ||
| Entrez ID: 6297 | HGNC ID: HGNC:10526 | Ensembl Gene: ENSG00000165821 | OMIM ID: 602219 |
| Drug and gene relationship at DGIdb | |||
Expression of SALL2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SALL2 | 6297 | 213283_s_at | -0.3462 | 0.3040 | |
| GSE20347 | SALL2 | 6297 | 213283_s_at | 0.2053 | 0.2430 | |
| GSE23400 | SALL2 | 6297 | 213283_s_at | -0.0438 | 0.3732 | |
| GSE26886 | SALL2 | 6297 | 213283_s_at | 0.7998 | 0.0443 | |
| GSE29001 | SALL2 | 6297 | 213283_s_at | -0.1589 | 0.6145 | |
| GSE38129 | SALL2 | 6297 | 213283_s_at | -0.0534 | 0.8021 | |
| GSE45670 | SALL2 | 6297 | 213283_s_at | -0.7514 | 0.0159 | |
| GSE63941 | SALL2 | 6297 | 213283_s_at | -1.3136 | 0.1044 | |
| GSE77861 | SALL2 | 6297 | 213283_s_at | 0.1735 | 0.5610 | |
| GSE97050 | SALL2 | 6297 | A_23_P48585 | -0.6044 | 0.1952 | |
| SRP064894 | SALL2 | 6297 | RNAseq | 0.3857 | 0.3009 | |
| SRP133303 | SALL2 | 6297 | RNAseq | -0.6762 | 0.0425 | |
| SRP159526 | SALL2 | 6297 | RNAseq | 0.7937 | 0.1448 | |
| SRP193095 | SALL2 | 6297 | RNAseq | 0.1876 | 0.4195 | |
| SRP219564 | SALL2 | 6297 | RNAseq | -0.1003 | 0.8361 | |
| TCGA | SALL2 | 6297 | RNAseq | -0.1833 | 0.3621 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SALL2 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of SALL2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SALL2 | 6297 | 9 | 3 | 18 | |
| GSE20123 | SALL2 | 6297 | 9 | 3 | 18 | |
| GSE43470 | SALL2 | 6297 | 7 | 2 | 34 | |
| GSE46452 | SALL2 | 6297 | 18 | 2 | 39 | |
| GSE47630 | SALL2 | 6297 | 10 | 10 | 20 | |
| GSE54993 | SALL2 | 6297 | 3 | 11 | 56 | |
| GSE54994 | SALL2 | 6297 | 17 | 6 | 30 | |
| GSE60625 | SALL2 | 6297 | 0 | 2 | 9 | |
| GSE74703 | SALL2 | 6297 | 6 | 2 | 28 | |
| GSE74704 | SALL2 | 6297 | 4 | 2 | 14 | |
| TCGA | SALL2 | 6297 | 27 | 16 | 53 |
Total number of gains: 110; Total number of losses: 59; Total Number of normals: 319.
Somatic mutations of SALL2:
Generating mutation plots.
Highly correlated genes for SALL2:
Showing top 20/518 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SALL2 | ZNF595 | 0.742493 | 3 | 0 | 3 |
| SALL2 | CYYR1 | 0.709566 | 3 | 0 | 3 |
| SALL2 | PREPL | 0.698364 | 3 | 0 | 3 |
| SALL2 | RYR3 | 0.698153 | 4 | 0 | 3 |
| SALL2 | ST6GAL2 | 0.695064 | 3 | 0 | 3 |
| SALL2 | RNF121 | 0.691928 | 3 | 0 | 3 |
| SALL2 | THOC5 | 0.690769 | 3 | 0 | 3 |
| SALL2 | NR2F2 | 0.681421 | 6 | 0 | 5 |
| SALL2 | SGTB | 0.679847 | 3 | 0 | 3 |
| SALL2 | TSPAN18 | 0.673955 | 5 | 0 | 4 |
| SALL2 | CCDC3 | 0.672387 | 4 | 0 | 3 |
| SALL2 | XKR4 | 0.671795 | 4 | 0 | 3 |
| SALL2 | FLNA | 0.670815 | 4 | 0 | 3 |
| SALL2 | RCN2 | 0.669119 | 3 | 0 | 3 |
| SALL2 | EFR3B | 0.665148 | 3 | 0 | 3 |
| SALL2 | RERG | 0.664133 | 3 | 0 | 3 |
| SALL2 | TCTN1 | 0.662819 | 4 | 0 | 3 |
| SALL2 | CLEC14A | 0.662542 | 3 | 0 | 3 |
| SALL2 | PARP11 | 0.661893 | 3 | 0 | 3 |
| SALL2 | PAM | 0.661779 | 3 | 0 | 3 |
For details and further investigation, click here
