| Full name: zinc finger protein 550 | Alias Symbol: MGC41917 | ||
| Type: protein-coding gene | Cytoband: 19q13.43 | ||
| Entrez ID: 162972 | HGNC ID: HGNC:28643 | Ensembl Gene: ENSG00000251369 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ZNF550:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZNF550 | 162972 | 228099_at | 0.3576 | 0.5429 | |
| GSE20347 | ZNF550 | 162972 | 215124_at | -0.0839 | 0.1063 | |
| GSE23400 | ZNF550 | 162972 | 215124_at | -0.1396 | 0.0003 | |
| GSE26886 | ZNF550 | 162972 | 228099_at | 0.3570 | 0.2427 | |
| GSE29001 | ZNF550 | 162972 | 215124_at | -0.0900 | 0.5185 | |
| GSE38129 | ZNF550 | 162972 | 215124_at | -0.1451 | 0.0025 | |
| GSE45670 | ZNF550 | 162972 | 228099_at | -0.0048 | 0.9867 | |
| GSE53622 | ZNF550 | 162972 | 79485 | -0.1711 | 0.0010 | |
| GSE53624 | ZNF550 | 162972 | 79485 | -0.0412 | 0.5545 | |
| GSE63941 | ZNF550 | 162972 | 228099_at | -0.1057 | 0.8292 | |
| GSE77861 | ZNF550 | 162972 | 228099_at | 0.0443 | 0.7427 | |
| GSE97050 | ZNF550 | 162972 | A_33_P3299386 | -0.0726 | 0.7698 | |
| SRP007169 | ZNF550 | 162972 | RNAseq | 0.0746 | 0.8823 | |
| SRP008496 | ZNF550 | 162972 | RNAseq | 0.2112 | 0.5890 | |
| SRP064894 | ZNF550 | 162972 | RNAseq | 0.0709 | 0.6878 | |
| SRP133303 | ZNF550 | 162972 | RNAseq | 0.1544 | 0.4904 | |
| SRP159526 | ZNF550 | 162972 | RNAseq | 0.1378 | 0.6842 | |
| SRP193095 | ZNF550 | 162972 | RNAseq | 0.2120 | 0.1258 | |
| SRP219564 | ZNF550 | 162972 | RNAseq | -0.5098 | 0.1020 | |
| TCGA | ZNF550 | 162972 | RNAseq | -0.0532 | 0.5454 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ZNF550 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ZNF550:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZNF550 | 162972 | 2 | 5 | 23 | |
| GSE20123 | ZNF550 | 162972 | 2 | 4 | 24 | |
| GSE43470 | ZNF550 | 162972 | 2 | 9 | 32 | |
| GSE46452 | ZNF550 | 162972 | 45 | 1 | 13 | |
| GSE47630 | ZNF550 | 162972 | 8 | 6 | 26 | |
| GSE54993 | ZNF550 | 162972 | 18 | 4 | 48 | |
| GSE54994 | ZNF550 | 162972 | 5 | 12 | 36 | |
| GSE60625 | ZNF550 | 162972 | 9 | 0 | 2 | |
| GSE74703 | ZNF550 | 162972 | 2 | 6 | 28 | |
| GSE74704 | ZNF550 | 162972 | 2 | 1 | 17 | |
| TCGA | ZNF550 | 162972 | 20 | 15 | 61 |
Total number of gains: 115; Total number of losses: 63; Total Number of normals: 310.
Somatic mutations of ZNF550:
Generating mutation plots.
Highly correlated genes for ZNF550:
Showing top 20/222 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZNF550 | UTP23 | 0.791704 | 3 | 0 | 3 |
| ZNF550 | GZF1 | 0.778558 | 3 | 0 | 3 |
| ZNF550 | DMAP1 | 0.768632 | 3 | 0 | 3 |
| ZNF550 | SLAIN1 | 0.763661 | 3 | 0 | 3 |
| ZNF550 | ZSCAN21 | 0.758053 | 3 | 0 | 3 |
| ZNF550 | CHCHD7 | 0.74831 | 3 | 0 | 3 |
| ZNF550 | SRSF6 | 0.737255 | 4 | 0 | 4 |
| ZNF550 | ZNF17 | 0.736483 | 3 | 0 | 3 |
| ZNF550 | NAPB | 0.728724 | 3 | 0 | 3 |
| ZNF550 | TERF1 | 0.724892 | 3 | 0 | 3 |
| ZNF550 | CCDC97 | 0.722921 | 3 | 0 | 3 |
| ZNF550 | ZSCAN12 | 0.721919 | 3 | 0 | 3 |
| ZNF550 | ZNF322 | 0.720336 | 3 | 0 | 3 |
| ZNF550 | ZNF141 | 0.719716 | 3 | 0 | 3 |
| ZNF550 | BIVM | 0.712015 | 3 | 0 | 3 |
| ZNF550 | KBTBD6 | 0.711216 | 3 | 0 | 3 |
| ZNF550 | DSTYK | 0.708875 | 3 | 0 | 3 |
| ZNF550 | SCMH1 | 0.707255 | 3 | 0 | 3 |
| ZNF550 | PACRGL | 0.706104 | 3 | 0 | 3 |
| ZNF550 | ZNF736 | 0.705021 | 3 | 0 | 3 |
For details and further investigation, click here
