ZSCAN12

 

Full name: zinc finger and SCAN domain containing 12 Alias Symbol: KIAA0426|ZNF29K1|ZFP96|dJ29K1.2
Type: protein-coding gene Cytoband: 6p22.1
Entrez ID: 9753 HGNC ID: HGNC:13172 Ensembl Gene: ENSG00000158691 OMIM ID: 603978
Drug and gene relationship at DGIdb

 

Expression of ZSCAN12:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZSCAN12 9753 206507_at 0.2044 0.7559
GSE20347 ZSCAN12 9753 206507_at 0.3843 0.0539
GSE23400 ZSCAN12 9753 217098_s_at 0.0543 0.0555
GSE26886 ZSCAN12 9753 206507_at 0.5499 0.0073
GSE29001 ZSCAN12 9753 206507_at 0.1008 0.6499
GSE38129 ZSCAN12 9753 206507_at 0.3003 0.0276
GSE45670 ZSCAN12 9753 206507_at -0.0319 0.8840
GSE53622 ZSCAN12 9753 43048 0.2085 0.0521
GSE53624 ZSCAN12 9753 43048 0.2468 0.1330
GSE63941 ZSCAN12 9753 206507_at -0.2002 0.6828
GSE77861 ZSCAN12 9753 240181_at -0.1435 0.1226
GSE97050 ZSCAN12 A_21_P0000037 0.0805 0.6699
SRP007169 ZSCAN12 9753 RNAseq 0.6718 0.2511
SRP008496 ZSCAN12 9753 RNAseq 1.1444 0.0060
SRP064894 ZSCAN12 9753 RNAseq 0.0623 0.7383
SRP133303 ZSCAN12 9753 RNAseq 0.1108 0.5620
SRP159526 ZSCAN12 9753 RNAseq 0.4465 0.1930
SRP193095 ZSCAN12 9753 RNAseq -0.1424 0.4798
SRP219564 ZSCAN12 9753 RNAseq 0.2929 0.4205
TCGA ZSCAN12 9753 RNAseq -0.1752 0.2241

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by ZSCAN12 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZSCAN12:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZSCAN12 9753 3 2 25
GSE20123 ZSCAN12 9753 3 2 25
GSE43470 ZSCAN12 9753 5 0 38
GSE46452 ZSCAN12 9753 1 10 48
GSE47630 ZSCAN12 9753 7 4 29
GSE54993 ZSCAN12 9753 2 1 67
GSE54994 ZSCAN12 9753 11 4 38
GSE60625 ZSCAN12 9753 0 1 10
GSE74703 ZSCAN12 9753 5 0 31
GSE74704 ZSCAN12 9753 0 1 19
TCGA ZSCAN12 9753 15 19 62

Total number of gains: 52; Total number of losses: 44; Total Number of normals: 392.  


 

Somatic mutations of ZSCAN12:

 

Generating mutation plots.

 

Highly correlated genes for ZSCAN12:

 

Showing top 20/294 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZSCAN12C6orf1360.816236303
ZSCAN12AURKAIP10.811988303
ZSCAN12YIPF30.808002303
ZSCAN12LRRC470.802708404
ZSCAN12MTOR0.796669303
ZSCAN12TMCO40.789951303
ZSCAN12TADA10.780526303
ZSCAN12ELAC20.771853303
ZSCAN12ZNF5640.770273303
ZSCAN12KIF240.762211303
ZSCAN12COMMD20.762194303
ZSCAN12KCTD150.754902303
ZSCAN12ZNF4700.746304303
ZSCAN12PLEKHF20.742978303
ZSCAN12ZNF1000.740937303
ZSCAN12RPP400.738117303
ZSCAN12HMGN10.734235303
ZSCAN12ZNF5700.732002403
ZSCAN12SLC30A50.730232303
ZSCAN12ACBD60.730157303

For details and further investigation, click here