AGPS

 

Full name: alkylglycerone phosphate synthase Alias Symbol: ADHAPS|ADAS|ALDHPSY|ADPS|ADAP-S
Type: protein-coding gene Cytoband: 2q31.2
Entrez ID: 8540 HGNC ID: HGNC:327 Ensembl Gene: ENSG00000018510 OMIM ID: 603051
Drug and gene relationship at DGIdb

 

Expression of AGPS:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 AGPS 8540 225114_at 0.6396 0.3648
GSE20347 AGPS 8540 205401_at 0.7255 0.0126
GSE23400 AGPS 8540 205401_at 0.9916 0.0000
GSE26886 AGPS 8540 225108_at 0.5295 0.0301
GSE29001 AGPS 8540 205401_at 0.7880 0.0230
GSE38129 AGPS 8540 205401_at 0.8976 0.0000
GSE45670 AGPS 8540 225114_at 0.6933 0.0005
GSE53622 AGPS 8540 66661 0.5410 0.0000
GSE53624 AGPS 8540 66661 0.9629 0.0000
GSE63941 AGPS 8540 225114_at 0.0549 0.9302
GSE77861 AGPS 8540 205401_at 0.3679 0.2526
GSE97050 AGPS 8540 A_23_P368645 0.2735 0.4516
SRP007169 AGPS 8540 RNAseq 1.0017 0.0061
SRP008496 AGPS 8540 RNAseq 1.0822 0.0000
SRP064894 AGPS 8540 RNAseq 0.6425 0.0004
SRP133303 AGPS 8540 RNAseq 0.6834 0.0000
SRP159526 AGPS 8540 RNAseq 0.1034 0.7925
SRP193095 AGPS 8540 RNAseq 0.1876 0.3097
SRP219564 AGPS 8540 RNAseq 0.2285 0.5039
TCGA AGPS 8540 RNAseq 0.1282 0.0220

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by AGPS expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of AGPS:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 AGPS 8540 11 0 19
GSE20123 AGPS 8540 11 0 19
GSE43470 AGPS 8540 5 1 37
GSE46452 AGPS 8540 1 4 54
GSE47630 AGPS 8540 4 4 32
GSE54993 AGPS 8540 0 5 65
GSE54994 AGPS 8540 11 4 38
GSE60625 AGPS 8540 0 3 8
GSE74703 AGPS 8540 4 1 31
GSE74704 AGPS 8540 6 0 14
TCGA AGPS 8540 29 7 60

Total number of gains: 82; Total number of losses: 29; Total Number of normals: 377.  


 

Somatic mutations of AGPS:

 

Generating mutation plots.

 

Highly correlated genes for AGPS:

 

Showing top 20/1232 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
AGPSSENP10.768684303
AGPSCCDC140.732748303
AGPSZNF7660.731182303
AGPSMTHFD1L0.722928303
AGPSZNF7000.720178303
AGPSZBTB340.716949303
AGPSZNF8080.714752303
AGPSMZT10.710931404
AGPSERLEC10.707907303
AGPSASAP20.697282303
AGPSLACTB0.692104404
AGPSBOD10.6899404
AGPSRNF60.687722303
AGPSRABEP10.682735505
AGPSSLC38A90.681991303
AGPSEME10.680172403
AGPSADNP0.67977303
AGPSDIS30.679751403
AGPSANLN0.679726706
AGPSTMEM170.674209403

For details and further investigation, click here