EME1

 

Full name: essential meiotic structure-specific endonuclease 1 Alias Symbol: FLJ31364|MMS4L|SLX2A
Type: protein-coding gene Cytoband: 17q21.33
Entrez ID: 146956 HGNC ID: HGNC:24965 Ensembl Gene: ENSG00000154920 OMIM ID: 610885
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of EME1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EME1 146956 234464_s_at 1.0045 0.0800
GSE26886 EME1 146956 234464_s_at 1.5534 0.0000
GSE45670 EME1 146956 234464_s_at 1.0794 0.0000
GSE63941 EME1 146956 234464_s_at 0.8849 0.0008
GSE77861 EME1 146956 234465_at 0.2690 0.0249
GSE97050 EME1 146956 A_23_P368225 0.5796 0.2151
SRP007169 EME1 146956 RNAseq 2.3750 0.0097
SRP064894 EME1 146956 RNAseq 1.8825 0.0000
SRP133303 EME1 146956 RNAseq 2.0148 0.0000
SRP159526 EME1 146956 RNAseq 2.4154 0.0000
SRP193095 EME1 146956 RNAseq 1.2336 0.0000
SRP219564 EME1 146956 RNAseq 2.0317 0.0003
TCGA EME1 146956 RNAseq 1.3656 0.0000

Upregulated datasets: 9; Downregulated datasets: 0.  


 

Survival by EME1 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of EME1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EME1 146956 5 2 23
GSE20123 EME1 146956 5 2 23
GSE43470 EME1 146956 3 2 38
GSE46452 EME1 146956 32 0 27
GSE47630 EME1 146956 9 0 31
GSE54993 EME1 146956 2 4 64
GSE54994 EME1 146956 9 6 38
GSE60625 EME1 146956 4 0 7
GSE74703 EME1 146956 3 2 31
GSE74704 EME1 146956 4 1 15
TCGA EME1 146956 27 7 62

Total number of gains: 103; Total number of losses: 26; Total Number of normals: 359.  


 

Somatic mutations of EME1:

 

Generating mutation plots.

 

Highly correlated genes for EME1:

 

Showing top 20/1707 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EME1GINS40.833553404
EME1ORC60.828683505
EME1SNRPG0.810573606
EME1VRK10.806282505
EME1CCNA20.798959505
EME1TMEM2230.797845505
EME1CENPN0.797543606
EME1MYBL20.795249606
EME1WDHD10.794269606
EME1PSMG30.791927505
EME1BIRC50.788251606
EME1EPHB40.782465505
EME1GINS10.777145606
EME1PSME40.775331505
EME1CDCA20.770292606
EME1ADAM170.769989504
EME1HPRT10.767661505
EME1USB10.766666404
EME1TMX10.766485303
EME1IGF2BP20.765788505

For details and further investigation, click here