| Full name: apolipoprotein F | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 12q13.3 | ||
| Entrez ID: 319 | HGNC ID: HGNC:615 | Ensembl Gene: ENSG00000175336 | OMIM ID: 107760 |
| Drug and gene relationship at DGIdb | |||
Expression of APOF:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | APOF | 319 | 207262_at | 0.0592 | 0.7760 | |
| GSE20347 | APOF | 319 | 207262_at | 0.0123 | 0.7920 | |
| GSE23400 | APOF | 319 | 207262_at | 0.0008 | 0.9591 | |
| GSE26886 | APOF | 319 | 207262_at | 0.1026 | 0.2330 | |
| GSE29001 | APOF | 319 | 207262_at | 0.1794 | 0.1547 | |
| GSE38129 | APOF | 319 | 207262_at | -0.0301 | 0.5412 | |
| GSE45670 | APOF | 319 | 207262_at | 0.0188 | 0.8372 | |
| GSE53622 | APOF | 319 | 145262 | 0.2147 | 0.1159 | |
| GSE53624 | APOF | 319 | 145262 | -0.3741 | 0.0001 | |
| GSE63941 | APOF | 319 | 207262_at | 0.0233 | 0.8789 | |
| GSE77861 | APOF | 319 | 207262_at | 0.0217 | 0.8390 | |
| SRP133303 | APOF | 319 | RNAseq | 0.3412 | 0.1552 | |
| TCGA | APOF | 319 | RNAseq | 2.0450 | 0.1442 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by APOF expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of APOF:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | APOF | 319 | 7 | 2 | 21 | |
| GSE20123 | APOF | 319 | 7 | 1 | 22 | |
| GSE43470 | APOF | 319 | 4 | 0 | 39 | |
| GSE46452 | APOF | 319 | 8 | 1 | 50 | |
| GSE47630 | APOF | 319 | 10 | 2 | 28 | |
| GSE54993 | APOF | 319 | 0 | 5 | 65 | |
| GSE54994 | APOF | 319 | 4 | 1 | 48 | |
| GSE60625 | APOF | 319 | 0 | 0 | 11 | |
| GSE74703 | APOF | 319 | 4 | 0 | 32 | |
| GSE74704 | APOF | 319 | 4 | 1 | 15 | |
| TCGA | APOF | 319 | 14 | 10 | 72 |
Total number of gains: 62; Total number of losses: 23; Total Number of normals: 403.
Somatic mutations of APOF:
Generating mutation plots.
Highly correlated genes for APOF:
Showing top 20/33 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| APOF | LIN28A | 0.758 | 3 | 0 | 3 |
| APOF | NPTX1 | 0.729726 | 3 | 0 | 3 |
| APOF | RNF5 | 0.648108 | 3 | 0 | 3 |
| APOF | RARRES1 | 0.64502 | 3 | 0 | 3 |
| APOF | SAFB2 | 0.643698 | 3 | 0 | 3 |
| APOF | OR10C1 | 0.630379 | 3 | 0 | 3 |
| APOF | C9 | 0.608036 | 4 | 0 | 3 |
| APOF | ORM1 | 0.589288 | 5 | 0 | 3 |
| APOF | TFAP4 | 0.585411 | 3 | 0 | 3 |
| APOF | IQCC | 0.574476 | 4 | 0 | 3 |
| APOF | APLP1 | 0.571793 | 4 | 0 | 3 |
| APOF | SOHLH1 | 0.568511 | 4 | 0 | 3 |
| APOF | HGD | 0.562228 | 5 | 0 | 3 |
| APOF | OXCT2 | 0.558765 | 4 | 0 | 4 |
| APOF | LINC01361 | 0.556311 | 3 | 0 | 3 |
| APOF | REG3A | 0.553488 | 4 | 0 | 3 |
| APOF | TP53I11 | 0.551109 | 4 | 0 | 3 |
| APOF | NLGN4Y | 0.550248 | 3 | 0 | 3 |
| APOF | TEX14 | 0.548418 | 4 | 0 | 3 |
| APOF | PRAC1 | 0.545408 | 4 | 0 | 3 |
For details and further investigation, click here
