APLP1

 

Full name: amyloid beta precursor like protein 1 Alias Symbol: APLP
Type: protein-coding gene Cytoband: 19q13.12
Entrez ID: 333 HGNC ID: HGNC:597 Ensembl Gene: ENSG00000105290 OMIM ID: 104775
Drug and gene relationship at DGIdb

 

Expression of APLP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 APLP1 333 209462_at 0.3495 0.3958
GSE20347 APLP1 333 209462_at 0.0920 0.3395
GSE23400 APLP1 333 209462_at -0.0654 0.1276
GSE26886 APLP1 333 209462_at 0.2844 0.0254
GSE29001 APLP1 333 209462_at 0.1823 0.4288
GSE38129 APLP1 333 209462_at -0.0038 0.9825
GSE45670 APLP1 333 209462_at 0.0617 0.6545
GSE53622 APLP1 333 3256 0.1987 0.1182
GSE53624 APLP1 333 3256 0.5109 0.0000
GSE63941 APLP1 333 209462_at -0.3202 0.4920
GSE77861 APLP1 333 209462_at 0.0908 0.5420
GSE97050 APLP1 333 A_23_P27983 0.1360 0.7250
SRP064894 APLP1 333 RNAseq 1.7933 0.0000
SRP133303 APLP1 333 RNAseq 0.6128 0.0822
SRP159526 APLP1 333 RNAseq 1.5498 0.0009
SRP219564 APLP1 333 RNAseq 0.5349 0.5272
TCGA APLP1 333 RNAseq -1.4003 0.0000

Upregulated datasets: 2; Downregulated datasets: 1.  


 

Survival by APLP1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of APLP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 APLP1 333 7 4 19
GSE20123 APLP1 333 7 3 20
GSE43470 APLP1 333 3 7 33
GSE46452 APLP1 333 48 1 10
GSE47630 APLP1 333 9 5 26
GSE54993 APLP1 333 17 3 50
GSE54994 APLP1 333 6 9 38
GSE60625 APLP1 333 9 0 2
GSE74703 APLP1 333 3 4 29
GSE74704 APLP1 333 6 1 13
TCGA APLP1 333 22 10 64

Total number of gains: 137; Total number of losses: 47; Total Number of normals: 304.  


 

Somatic mutations of APLP1:

 

Generating mutation plots.

 

Highly correlated genes for APLP1:

 

Showing top 20/369 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
APLP1UCN0.735728303
APLP1ALG120.691418303
APLP1TMEM1380.661401303
APLP1SMARCD10.660808403
APLP1COMMD70.658081303
APLP1TRIM470.657703403
APLP1NXPH40.65539403
APLP1C17orf670.653422303
APLP1SLC46A10.652465303
APLP1AFF20.64482303
APLP1CCDC1240.643721303
APLP1SLC17A60.642694303
APLP1SPEN0.637702303
APLP1SYN10.637643504
APLP1ANKRD90.635544303
APLP1FIBCD10.631042303
APLP1PFN10.626946303
APLP1TNFSF180.625197303
APLP1RFNG0.620864303
APLP1MAST20.620518605

For details and further investigation, click here