ATF7IP

 

Full name: activating transcription factor 7 interacting protein Alias Symbol: FLJ10688|p621
Type: protein-coding gene Cytoband: 12p13.1
Entrez ID: 55729 HGNC ID: HGNC:20092 Ensembl Gene: ENSG00000171681 OMIM ID: 613644
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ATF7IP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ATF7IP 55729 231825_x_at 0.1958 0.7666
GSE20347 ATF7IP 55729 218987_at -0.1233 0.4734
GSE23400 ATF7IP 55729 218987_at 0.0583 0.4921
GSE26886 ATF7IP 55729 225917_at -0.1865 0.4345
GSE29001 ATF7IP 55729 218987_at -0.0582 0.8501
GSE38129 ATF7IP 55729 218987_at -0.0749 0.6436
GSE45670 ATF7IP 55729 231825_x_at 0.2683 0.0184
GSE53622 ATF7IP 55729 2331 0.0296 0.7033
GSE53624 ATF7IP 55729 2331 0.0985 0.1320
GSE63941 ATF7IP 55729 231825_x_at 0.0848 0.7217
GSE77861 ATF7IP 55729 231825_x_at 0.6330 0.0811
GSE97050 ATF7IP 55729 A_24_P923757 0.2862 0.2859
SRP007169 ATF7IP 55729 RNAseq -0.1962 0.6356
SRP008496 ATF7IP 55729 RNAseq -0.0641 0.8167
SRP064894 ATF7IP 55729 RNAseq -0.4872 0.0300
SRP133303 ATF7IP 55729 RNAseq 0.1492 0.4636
SRP159526 ATF7IP 55729 RNAseq -0.0608 0.8001
SRP193095 ATF7IP 55729 RNAseq -0.0985 0.4094
SRP219564 ATF7IP 55729 RNAseq -0.5142 0.2105
TCGA ATF7IP 55729 RNAseq 0.1909 0.0002

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ATF7IP expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ATF7IP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ATF7IP 55729 6 2 22
GSE20123 ATF7IP 55729 6 2 22
GSE43470 ATF7IP 55729 9 4 30
GSE46452 ATF7IP 55729 10 1 48
GSE47630 ATF7IP 55729 14 1 25
GSE54993 ATF7IP 55729 1 9 60
GSE54994 ATF7IP 55729 10 2 41
GSE60625 ATF7IP 55729 0 1 10
GSE74703 ATF7IP 55729 9 3 24
GSE74704 ATF7IP 55729 4 1 15
TCGA ATF7IP 55729 41 6 49

Total number of gains: 110; Total number of losses: 32; Total Number of normals: 346.  


 

Somatic mutations of ATF7IP:

 

Generating mutation plots.

 

Highly correlated genes for ATF7IP:

 

Showing top 20/159 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ATF7IPPPIG0.841383303
ATF7IPNLN0.834426505
ATF7IPCHD70.818138303
ATF7IPTRMT10B0.801995303
ATF7IPSAMD4B0.791017303
ATF7IPSSB0.769194303
ATF7IPNPHP30.768849303
ATF7IPOCIAD10.760809404
ATF7IPNBEAL10.760339303
ATF7IPNIT20.746792303
ATF7IPZBED60.735737303
ATF7IPSYMPK0.734589505
ATF7IPWDR750.734402303
ATF7IPNAA150.728082404
ATF7IPRASEF0.719543303
ATF7IPMBD30.716899303
ATF7IPCCAR10.715327404
ATF7IPVPS13B0.713066303
ATF7IPUBE2W0.712545303
ATF7IPZNF33A0.711381303

For details and further investigation, click here