| Full name: barrier to autointegration factor 2 | Alias Symbol: dJ803K15.1|BAF-L|BAFL|BAF2 | ||
| Type: protein-coding gene | Cytoband: 20p12.1 | ||
| Entrez ID: 140836 | HGNC ID: HGNC:16172 | Ensembl Gene: ENSG00000125888 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of BANF2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | BANF2 | 140836 | 232766_at | -0.0483 | 0.8585 | |
| GSE26886 | BANF2 | 140836 | 232766_at | -0.1094 | 0.2560 | |
| GSE45670 | BANF2 | 140836 | 232766_at | 0.0358 | 0.6090 | |
| GSE53622 | BANF2 | 140836 | 33051 | 0.0628 | 0.7151 | |
| GSE53624 | BANF2 | 140836 | 33051 | -0.2924 | 0.0021 | |
| GSE63941 | BANF2 | 140836 | 232766_at | 0.2621 | 0.0541 | |
| GSE77861 | BANF2 | 140836 | 232766_at | -0.0046 | 0.9673 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by BANF2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of BANF2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | BANF2 | 140836 | 12 | 3 | 15 | |
| GSE20123 | BANF2 | 140836 | 12 | 3 | 15 | |
| GSE43470 | BANF2 | 140836 | 11 | 1 | 31 | |
| GSE46452 | BANF2 | 140836 | 27 | 1 | 31 | |
| GSE47630 | BANF2 | 140836 | 17 | 4 | 19 | |
| GSE54993 | BANF2 | 140836 | 0 | 15 | 55 | |
| GSE54994 | BANF2 | 140836 | 26 | 2 | 25 | |
| GSE60625 | BANF2 | 140836 | 0 | 0 | 11 | |
| GSE74703 | BANF2 | 140836 | 8 | 1 | 27 | |
| GSE74704 | BANF2 | 140836 | 7 | 2 | 11 | |
| TCGA | BANF2 | 140836 | 43 | 10 | 43 |
Total number of gains: 163; Total number of losses: 42; Total Number of normals: 283.
Somatic mutations of BANF2:
Generating mutation plots.
Highly correlated genes for BANF2:
Showing top 20/32 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| BANF2 | PTH2 | 0.68553 | 3 | 0 | 3 |
| BANF2 | MPP2 | 0.685343 | 3 | 0 | 3 |
| BANF2 | AFMID | 0.654135 | 3 | 0 | 3 |
| BANF2 | CLDN2 | 0.633647 | 3 | 0 | 3 |
| BANF2 | AVPR1A | 0.619992 | 3 | 0 | 3 |
| BANF2 | ELANE | 0.618862 | 3 | 0 | 3 |
| BANF2 | C9orf50 | 0.616333 | 3 | 0 | 3 |
| BANF2 | ARX | 0.602622 | 4 | 0 | 3 |
| BANF2 | OR1C1 | 0.597788 | 4 | 0 | 4 |
| BANF2 | C10orf95 | 0.597703 | 3 | 0 | 3 |
| BANF2 | C2orf73 | 0.596458 | 4 | 0 | 3 |
| BANF2 | MAP1LC3C | 0.579874 | 3 | 0 | 3 |
| BANF2 | LRFN2 | 0.578911 | 3 | 0 | 3 |
| BANF2 | PPP2R1A | 0.577555 | 3 | 0 | 3 |
| BANF2 | ZG16 | 0.576703 | 3 | 0 | 3 |
| BANF2 | HHIP-AS1 | 0.571153 | 4 | 0 | 3 |
| BANF2 | CHRNA2 | 0.566163 | 4 | 0 | 3 |
| BANF2 | UTS2R | 0.564933 | 5 | 0 | 3 |
| BANF2 | C1orf94 | 0.561847 | 3 | 0 | 3 |
| BANF2 | IQCJ-SCHIP1-AS1 | 0.559402 | 4 | 0 | 3 |
For details and further investigation, click here
