| Full name: microtubule associated protein 1 light chain 3 gamma | Alias Symbol: ATG8J | ||
| Type: protein-coding gene | Cytoband: 1q43 | ||
| Entrez ID: 440738 | HGNC ID: HGNC:13353 | Ensembl Gene: ENSG00000197769 | OMIM ID: 609605 |
| Drug and gene relationship at DGIdb | |||
Expression of MAP1LC3C:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | MAP1LC3C | 440738 | 221697_at | -0.7205 | 0.1928 | |
| GSE20347 | MAP1LC3C | 440738 | 221697_at | 0.0050 | 0.9395 | |
| GSE23400 | MAP1LC3C | 440738 | 221697_at | -0.1339 | 0.0000 | |
| GSE26886 | MAP1LC3C | 440738 | 221697_at | -0.1743 | 0.2459 | |
| GSE29001 | MAP1LC3C | 440738 | 221697_at | -0.0264 | 0.8823 | |
| GSE38129 | MAP1LC3C | 440738 | 221697_at | -0.1622 | 0.0503 | |
| GSE45670 | MAP1LC3C | 440738 | 221697_at | -0.3119 | 0.0011 | |
| GSE53622 | MAP1LC3C | 440738 | 2237 | -0.1304 | 0.1253 | |
| GSE53624 | MAP1LC3C | 440738 | 2237 | 0.0943 | 0.4155 | |
| GSE63941 | MAP1LC3C | 440738 | 221697_at | -0.4661 | 0.0044 | |
| GSE77861 | MAP1LC3C | 440738 | 221697_at | -0.0541 | 0.7423 | |
| SRP133303 | MAP1LC3C | 440738 | RNAseq | 0.4057 | 0.2659 | |
| TCGA | MAP1LC3C | 440738 | RNAseq | -3.0136 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by MAP1LC3C expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of MAP1LC3C:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | MAP1LC3C | 440738 | 6 | 1 | 23 | |
| GSE20123 | MAP1LC3C | 440738 | 6 | 1 | 23 | |
| GSE43470 | MAP1LC3C | 440738 | 6 | 1 | 36 | |
| GSE46452 | MAP1LC3C | 440738 | 4 | 2 | 53 | |
| GSE47630 | MAP1LC3C | 440738 | 15 | 0 | 25 | |
| GSE54993 | MAP1LC3C | 440738 | 0 | 6 | 64 | |
| GSE54994 | MAP1LC3C | 440738 | 18 | 0 | 35 | |
| GSE60625 | MAP1LC3C | 440738 | 0 | 0 | 11 | |
| GSE74703 | MAP1LC3C | 440738 | 6 | 1 | 29 | |
| GSE74704 | MAP1LC3C | 440738 | 2 | 0 | 18 | |
| TCGA | MAP1LC3C | 440738 | 43 | 4 | 49 |
Total number of gains: 106; Total number of losses: 16; Total Number of normals: 366.
Somatic mutations of MAP1LC3C:
Generating mutation plots.
Highly correlated genes for MAP1LC3C:
Showing top 20/502 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| MAP1LC3C | CLC | 0.702972 | 3 | 0 | 3 |
| MAP1LC3C | FCGR2C | 0.693075 | 3 | 0 | 3 |
| MAP1LC3C | S100G | 0.690376 | 3 | 0 | 3 |
| MAP1LC3C | LILRA3 | 0.685664 | 3 | 0 | 3 |
| MAP1LC3C | RNASE4 | 0.685052 | 3 | 0 | 3 |
| MAP1LC3C | COLEC10 | 0.684748 | 4 | 0 | 4 |
| MAP1LC3C | LINC01013 | 0.677707 | 3 | 0 | 3 |
| MAP1LC3C | ABCA6 | 0.674494 | 6 | 0 | 5 |
| MAP1LC3C | ADAMTS9-AS2 | 0.667472 | 4 | 0 | 4 |
| MAP1LC3C | POU4F2 | 0.665088 | 5 | 0 | 5 |
| MAP1LC3C | MLLT10 | 0.661733 | 4 | 0 | 4 |
| MAP1LC3C | MYEF2 | 0.661574 | 3 | 0 | 3 |
| MAP1LC3C | MYOCD | 0.661377 | 3 | 0 | 3 |
| MAP1LC3C | GAD2 | 0.656696 | 5 | 0 | 3 |
| MAP1LC3C | TCL1B | 0.656569 | 4 | 0 | 4 |
| MAP1LC3C | HMHB1 | 0.655593 | 4 | 0 | 3 |
| MAP1LC3C | SLC45A2 | 0.654385 | 4 | 0 | 4 |
| MAP1LC3C | ADCY5 | 0.653378 | 4 | 0 | 3 |
| MAP1LC3C | ASPA | 0.653238 | 4 | 0 | 4 |
| MAP1LC3C | GALNT15 | 0.649823 | 4 | 0 | 4 |
For details and further investigation, click here
