| Full name: chromosome 12 open reading frame 50 | Alias Symbol: FLJ35821 | ||
| Type: protein-coding gene | Cytoband: 12q21.32 | ||
| Entrez ID: 160419 | HGNC ID: HGNC:26665 | Ensembl Gene: ENSG00000165805 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C12orf50:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C12orf50 | 160419 | 238219_at | 0.0143 | 0.9576 | |
| GSE26886 | C12orf50 | 160419 | 238219_at | -0.0029 | 0.9759 | |
| GSE45670 | C12orf50 | 160419 | 238219_at | 0.0252 | 0.7489 | |
| GSE53622 | C12orf50 | 160419 | 66438 | -0.0101 | 0.9378 | |
| GSE53624 | C12orf50 | 160419 | 66438 | -0.0034 | 0.9862 | |
| GSE63941 | C12orf50 | 160419 | 238219_at | 0.0710 | 0.5381 | |
| GSE77861 | C12orf50 | 160419 | 238219_at | -0.1170 | 0.2652 | |
| GSE97050 | C12orf50 | 160419 | A_33_P3288431 | 0.0201 | 0.9349 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C12orf50 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C12orf50:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C12orf50 | 160419 | 3 | 3 | 24 | |
| GSE20123 | C12orf50 | 160419 | 3 | 3 | 24 | |
| GSE43470 | C12orf50 | 160419 | 3 | 1 | 39 | |
| GSE46452 | C12orf50 | 160419 | 9 | 1 | 49 | |
| GSE47630 | C12orf50 | 160419 | 10 | 1 | 29 | |
| GSE54993 | C12orf50 | 160419 | 0 | 6 | 64 | |
| GSE54994 | C12orf50 | 160419 | 7 | 1 | 45 | |
| GSE60625 | C12orf50 | 160419 | 0 | 0 | 11 | |
| GSE74703 | C12orf50 | 160419 | 3 | 1 | 32 | |
| GSE74704 | C12orf50 | 160419 | 1 | 3 | 16 | |
| TCGA | C12orf50 | 160419 | 19 | 10 | 67 |
Total number of gains: 58; Total number of losses: 30; Total Number of normals: 400.
Somatic mutations of C12orf50:
Generating mutation plots.
Highly correlated genes for C12orf50:
Showing top 20/65 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C12orf50 | GSTCD | 0.787556 | 3 | 0 | 3 |
| C12orf50 | CCIN | 0.769657 | 3 | 0 | 3 |
| C12orf50 | VAX2 | 0.761902 | 3 | 0 | 3 |
| C12orf50 | CDH24 | 0.755072 | 3 | 0 | 3 |
| C12orf50 | AFTPH | 0.752851 | 3 | 0 | 3 |
| C12orf50 | NKX2-5 | 0.747691 | 3 | 0 | 3 |
| C12orf50 | SFTPA2 | 0.743209 | 3 | 0 | 3 |
| C12orf50 | ZNF614 | 0.743098 | 3 | 0 | 3 |
| C12orf50 | OR2T33 | 0.742009 | 3 | 0 | 3 |
| C12orf50 | SLC36A4 | 0.727765 | 3 | 0 | 3 |
| C12orf50 | THRAP3 | 0.727323 | 3 | 0 | 3 |
| C12orf50 | KRTAP9-6 | 0.703573 | 3 | 0 | 3 |
| C12orf50 | SLC13A2 | 0.702153 | 4 | 0 | 3 |
| C12orf50 | ZNF878 | 0.700793 | 3 | 0 | 3 |
| C12orf50 | OR2AT4 | 0.695417 | 3 | 0 | 3 |
| C12orf50 | GRIA4 | 0.689407 | 3 | 0 | 3 |
| C12orf50 | SPEG | 0.681966 | 3 | 0 | 3 |
| C12orf50 | SZT2 | 0.672362 | 3 | 0 | 3 |
| C12orf50 | KCNK17 | 0.664358 | 3 | 0 | 3 |
| C12orf50 | OR7G1 | 0.664109 | 3 | 0 | 3 |
For details and further investigation, click here
