C19orf44

 

Full name: chromosome 19 open reading frame 44 Alias Symbol: FLJ21742
Type: protein-coding gene Cytoband: 19p13.11
Entrez ID: 84167 HGNC ID: HGNC:26141 Ensembl Gene: ENSG00000105072 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C19orf44:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C19orf44 84167 232730_at -0.0730 0.7951
GSE26886 C19orf44 84167 232730_at 0.7811 0.0000
GSE45670 C19orf44 84167 232730_at 0.0536 0.6658
GSE53622 C19orf44 84167 70923 0.3036 0.0003
GSE53624 C19orf44 84167 70923 0.3111 0.0004
GSE63941 C19orf44 84167 232730_at 0.2545 0.2534
GSE77861 C19orf44 84167 232730_at -0.0761 0.5548
GSE97050 C19orf44 84167 A_23_P107801 0.3332 0.1906
SRP007169 C19orf44 84167 RNAseq 1.3405 0.0868
SRP064894 C19orf44 84167 RNAseq 0.5379 0.0513
SRP133303 C19orf44 84167 RNAseq -0.1269 0.4865
SRP159526 C19orf44 84167 RNAseq 0.5728 0.1596
SRP193095 C19orf44 84167 RNAseq 0.4290 0.0007
SRP219564 C19orf44 84167 RNAseq 0.0191 0.9660
TCGA C19orf44 84167 RNAseq -0.0450 0.5587

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C19orf44 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C19orf44:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C19orf44 84167 4 3 23
GSE20123 C19orf44 84167 3 2 25
GSE43470 C19orf44 84167 2 6 35
GSE46452 C19orf44 84167 47 1 11
GSE47630 C19orf44 84167 4 8 28
GSE54993 C19orf44 84167 15 4 51
GSE54994 C19orf44 84167 6 14 33
GSE60625 C19orf44 84167 9 0 2
GSE74703 C19orf44 84167 2 4 30
GSE74704 C19orf44 84167 0 1 19
TCGA C19orf44 84167 17 9 70

Total number of gains: 109; Total number of losses: 52; Total Number of normals: 327.  


 

Somatic mutations of C19orf44:

 

Generating mutation plots.

 

Highly correlated genes for C19orf44:

 

Showing top 20/401 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C19orf44FBRSL10.843972404
C19orf44SUN50.839387303
C19orf44DCDC10.817171303
C19orf44MAPK8IP20.805843303
C19orf44GNL10.800072303
C19orf44FOXE30.795077303
C19orf44C2CD4D0.794122303
C19orf44ANKDD1A0.790834303
C19orf44CELF50.787474303
C19orf44TUT10.787317303
C19orf44CSH20.783037303
C19orf44C1QL20.782315303
C19orf44CCNJL0.780453303
C19orf44COL16A10.78031303
C19orf44PHF10.777826303
C19orf44IL1F100.777082303
C19orf44ADRA1A0.774311303
C19orf44SLC26A10.773404
C19orf44SERPINA100.772964303
C19orf44PLA2G2C0.772168303

For details and further investigation, click here