CA6

 

Full name: carbonic anhydrase 6 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p36.23
Entrez ID: 765 HGNC ID: HGNC:1380 Ensembl Gene: ENSG00000131686 OMIM ID: 114780
Drug and gene relationship at DGIdb

 

Expression of CA6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CA6 765 206873_at 0.1293 0.4284
GSE20347 CA6 765 206873_at 0.2184 0.2147
GSE23400 CA6 765 206873_at -0.0283 0.4651
GSE26886 CA6 765 206873_at 0.1114 0.3534
GSE29001 CA6 765 206873_at 0.2309 0.6095
GSE38129 CA6 765 206873_at 0.2724 0.2339
GSE45670 CA6 765 206873_at 0.2250 0.0986
GSE53622 CA6 765 40137 0.4983 0.0000
GSE53624 CA6 765 40137 0.1908 0.0428
GSE63941 CA6 765 206873_at 0.2272 0.4208
GSE77861 CA6 765 206873_at 0.0121 0.9243
GSE97050 CA6 765 A_33_P3334398 0.1689 0.4352
TCGA CA6 765 RNAseq 2.4452 0.0843

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CA6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CA6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CA6 765 1 5 24
GSE20123 CA6 765 1 3 26
GSE43470 CA6 765 6 5 32
GSE46452 CA6 765 7 1 51
GSE47630 CA6 765 8 4 28
GSE54993 CA6 765 3 2 65
GSE54994 CA6 765 12 4 37
GSE60625 CA6 765 0 0 11
GSE74703 CA6 765 5 3 28
GSE74704 CA6 765 1 0 19
TCGA CA6 765 11 24 61

Total number of gains: 55; Total number of losses: 51; Total Number of normals: 382.  


 

Somatic mutations of CA6:

 

Generating mutation plots.

 

Highly correlated genes for CA6:

 

Showing top 20/400 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CA6FBRSL10.828895303
CA6STRC0.815157303
CA6DCDC10.814563303
CA6ANXA100.805763303
CA6CLTCL10.805035303
CA6ZNF5270.789027303
CA6CIB30.787767303
CA6WDR870.779461303
CA6C2CD4D0.777955303
CA6TP730.77645404
CA6ERC20.774781303
CA6PLA2G2C0.769658303
CA6C20orf850.76465303
CA6RASL10B0.761725303
CA6TOR2A0.761572303
CA6CELF50.761543303
CA6BTNL20.751653404
CA6MRGPRG0.743849303
CA6YY20.742115303
CA6OR2C30.73934303

For details and further investigation, click here