CALN1

 

Full name: calneuron 1 Alias Symbol: CABP8
Type: protein-coding gene Cytoband: 7q11.22
Entrez ID: 83698 HGNC ID: HGNC:13248 Ensembl Gene: ENSG00000183166 OMIM ID: 607176
Drug and gene relationship at DGIdb

 

Expression of CALN1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CALN1 83698 1555168_a_at -0.0593 0.8646
GSE26886 CALN1 83698 1555168_a_at 0.3418 0.1684
GSE45670 CALN1 83698 1555168_a_at 0.1268 0.5090
GSE53622 CALN1 83698 112834 0.7154 0.0224
GSE53624 CALN1 83698 112834 0.1542 0.5146
GSE63941 CALN1 83698 1555168_a_at 0.1170 0.7202
GSE77861 CALN1 83698 1555168_a_at -0.0622 0.6647
SRP133303 CALN1 83698 RNAseq 0.1374 0.6733
TCGA CALN1 83698 RNAseq 1.7638 0.0256

Upregulated datasets: 1; Downregulated datasets: 0.  

 

Survival by CALN1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CALN1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CALN1 83698 11 1 18
GSE20123 CALN1 83698 11 1 18
GSE43470 CALN1 83698 3 2 38
GSE46452 CALN1 83698 12 0 47
GSE47630 CALN1 83698 7 2 31
GSE54993 CALN1 83698 2 7 61
GSE54994 CALN1 83698 13 2 38
GSE60625 CALN1 83698 0 0 11
GSE74703 CALN1 83698 3 1 32
GSE74704 CALN1 83698 7 1 12
TCGA CALN1 83698 45 8 43

Total number of gains: 114; Total number of losses: 25; Total Number of normals: 349.  

 

Somatic mutations of CALN1:

 

Generating mutation plots.

 

Highly correlated genes for CALN1:

 

Showing all 13 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CALN1PCYT1B0.701837303
CALN1IRX10.626556303
CALN1CD79B0.590554303
CALN1RAB180.59033303
CALN1PGLYRP20.584034303
CALN1NEUROG20.573725403
CALN1PKN10.573427403
CALN1BACH20.571106403
CALN1GPR1460.565037303
CALN1NEK100.564364303
CALN1DKK20.556489403
CALN1SLC25A470.54331303
CALN1MYBPC20.520728403

For details and further investigation, click here