| Full name: collagen and calcium binding EGF domains 1 | Alias Symbol: FLJ30681|KIAA1983 | ||
| Type: protein-coding gene | Cytoband: 18q21.32 | ||
| Entrez ID: 147372 | HGNC ID: HGNC:29426 | Ensembl Gene: ENSG00000183287 | OMIM ID: 612753 |
| Drug and gene relationship at DGIdb | |||
Expression of CCBE1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCBE1 | 147372 | 229641_at | -1.1360 | 0.0127 | |
| GSE26886 | CCBE1 | 147372 | 229641_at | -0.0438 | 0.9142 | |
| GSE45670 | CCBE1 | 147372 | 229641_at | -1.2261 | 0.0001 | |
| GSE53622 | CCBE1 | 147372 | 143031 | -1.1003 | 0.0000 | |
| GSE53624 | CCBE1 | 147372 | 143031 | -0.8523 | 0.0000 | |
| GSE63941 | CCBE1 | 147372 | 229641_at | -4.0230 | 0.0001 | |
| GSE77861 | CCBE1 | 147372 | 229641_at | -0.3143 | 0.0331 | |
| GSE97050 | CCBE1 | 147372 | A_23_P55544 | 0.2393 | 0.6221 | |
| SRP007169 | CCBE1 | 147372 | RNAseq | -0.2592 | 0.6492 | |
| SRP064894 | CCBE1 | 147372 | RNAseq | -0.1754 | 0.6170 | |
| SRP133303 | CCBE1 | 147372 | RNAseq | -0.5392 | 0.0458 | |
| SRP159526 | CCBE1 | 147372 | RNAseq | -0.9194 | 0.1249 | |
| SRP193095 | CCBE1 | 147372 | RNAseq | 0.6375 | 0.0106 | |
| SRP219564 | CCBE1 | 147372 | RNAseq | -1.2503 | 0.0054 | |
| TCGA | CCBE1 | 147372 | RNAseq | -1.6161 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 6.
Survival by CCBE1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCBE1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCBE1 | 147372 | 1 | 9 | 20 | |
| GSE20123 | CCBE1 | 147372 | 1 | 9 | 20 | |
| GSE43470 | CCBE1 | 147372 | 0 | 5 | 38 | |
| GSE46452 | CCBE1 | 147372 | 1 | 26 | 32 | |
| GSE47630 | CCBE1 | 147372 | 5 | 20 | 15 | |
| GSE54993 | CCBE1 | 147372 | 10 | 0 | 60 | |
| GSE54994 | CCBE1 | 147372 | 0 | 18 | 35 | |
| GSE60625 | CCBE1 | 147372 | 0 | 4 | 7 | |
| GSE74703 | CCBE1 | 147372 | 0 | 5 | 31 | |
| GSE74704 | CCBE1 | 147372 | 1 | 6 | 13 | |
| TCGA | CCBE1 | 147372 | 9 | 44 | 43 |
Total number of gains: 28; Total number of losses: 146; Total Number of normals: 314.
Somatic mutations of CCBE1:
Generating mutation plots.
Highly correlated genes for CCBE1:
Showing top 20/196 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCBE1 | ZNF626 | 0.833203 | 3 | 0 | 3 |
| CCBE1 | PTN | 0.771526 | 3 | 0 | 3 |
| CCBE1 | NAV2-AS5 | 0.755888 | 3 | 0 | 3 |
| CCBE1 | GSTM5 | 0.719282 | 3 | 0 | 3 |
| CCBE1 | ZNF583 | 0.702532 | 3 | 0 | 3 |
| CCBE1 | USP4 | 0.698465 | 3 | 0 | 3 |
| CCBE1 | LINC00327 | 0.683977 | 3 | 0 | 3 |
| CCBE1 | FHOD3 | 0.672704 | 3 | 0 | 3 |
| CCBE1 | FBXW7 | 0.671502 | 3 | 0 | 3 |
| CCBE1 | C5orf66-AS1 | 0.667666 | 3 | 0 | 3 |
| CCBE1 | VASN | 0.667237 | 4 | 0 | 3 |
| CCBE1 | MOSPD1 | 0.660041 | 4 | 0 | 3 |
| CCBE1 | TCF21 | 0.655726 | 5 | 0 | 5 |
| CCBE1 | FAM13C | 0.655109 | 4 | 0 | 3 |
| CCBE1 | PDZRN3 | 0.654321 | 4 | 0 | 3 |
| CCBE1 | MDFIC | 0.650417 | 4 | 0 | 3 |
| CCBE1 | PDCD7 | 0.650239 | 3 | 0 | 3 |
| CCBE1 | MATN3 | 0.649842 | 3 | 0 | 3 |
| CCBE1 | PPP3CC | 0.648808 | 4 | 0 | 3 |
| CCBE1 | ARHGEF12 | 0.646158 | 4 | 0 | 3 |
For details and further investigation, click here
