| Full name: clathrin heavy chain linker domain containing 1 | Alias Symbol: FLJ31438 | ||
| Type: protein-coding gene | Cytoband: 2p16.1 | ||
| Entrez ID: 130162 | HGNC ID: HGNC:26453 | Ensembl Gene: ENSG00000162994 | OMIM ID: |
Expression of CLHC1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLHC1 | 130162 | 228316_at | -0.3488 | 0.6832 | |
| GSE26886 | CLHC1 | 130162 | 228316_at | -0.3833 | 0.2627 | |
| GSE45670 | CLHC1 | 130162 | 228316_at | 0.3936 | 0.1519 | |
| GSE53622 | CLHC1 | 130162 | 23371 | 0.0022 | 0.9828 | |
| GSE53624 | CLHC1 | 130162 | 23371 | -0.5372 | 0.0000 | |
| GSE63941 | CLHC1 | 130162 | 228316_at | -0.1528 | 0.8585 | |
| GSE77861 | CLHC1 | 130162 | 228316_at | 0.0994 | 0.6567 | |
| SRP007169 | CLHC1 | 130162 | RNAseq | 0.1170 | 0.8322 | |
| SRP064894 | CLHC1 | 130162 | RNAseq | -0.0389 | 0.8574 | |
| SRP133303 | CLHC1 | 130162 | RNAseq | -0.0191 | 0.9351 | |
| SRP159526 | CLHC1 | 130162 | RNAseq | 0.0495 | 0.8548 | |
| SRP193095 | CLHC1 | 130162 | RNAseq | -0.0044 | 0.9768 | |
| SRP219564 | CLHC1 | 130162 | RNAseq | -0.0392 | 0.8768 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CLHC1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CLHC1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLHC1 | 130162 | 10 | 0 | 20 | |
| GSE20123 | CLHC1 | 130162 | 9 | 0 | 21 | |
| GSE43470 | CLHC1 | 130162 | 5 | 0 | 38 | |
| GSE46452 | CLHC1 | 130162 | 2 | 3 | 54 | |
| GSE47630 | CLHC1 | 130162 | 8 | 0 | 32 | |
| GSE54993 | CLHC1 | 130162 | 0 | 5 | 65 | |
| GSE54994 | CLHC1 | 130162 | 12 | 0 | 41 | |
| GSE60625 | CLHC1 | 130162 | 0 | 3 | 8 | |
| GSE74703 | CLHC1 | 130162 | 5 | 0 | 31 | |
| GSE74704 | CLHC1 | 130162 | 9 | 0 | 11 | |
| TCGA | CLHC1 | 130162 | 34 | 3 | 59 |
Total number of gains: 94; Total number of losses: 14; Total Number of normals: 380.
Somatic mutations of CLHC1:
Generating mutation plots.
Highly correlated genes for CLHC1:
Showing top 20/26 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLHC1 | FAM120C | 0.729376 | 3 | 0 | 3 |
| CLHC1 | CHRNA2 | 0.713494 | 3 | 0 | 3 |
| CLHC1 | TRIM2 | 0.698459 | 3 | 0 | 3 |
| CLHC1 | CTPS2 | 0.69464 | 3 | 0 | 3 |
| CLHC1 | IL21R-AS1 | 0.664421 | 3 | 0 | 3 |
| CLHC1 | LINC00960 | 0.659656 | 3 | 0 | 3 |
| CLHC1 | BAALC | 0.634395 | 3 | 0 | 3 |
| CLHC1 | GLCE | 0.598434 | 5 | 0 | 4 |
| CLHC1 | NBPF3 | 0.592363 | 4 | 0 | 3 |
| CLHC1 | TTC19 | 0.589829 | 4 | 0 | 3 |
| CLHC1 | ZNF248 | 0.58927 | 3 | 0 | 3 |
| CLHC1 | ESX1 | 0.584542 | 4 | 0 | 3 |
| CLHC1 | PAXBP1 | 0.581003 | 4 | 0 | 3 |
| CLHC1 | LRIT1 | 0.579356 | 3 | 0 | 3 |
| CLHC1 | SLC6A3 | 0.576668 | 3 | 0 | 3 |
| CLHC1 | HIC2 | 0.574485 | 4 | 0 | 3 |
| CLHC1 | CXorf38 | 0.573808 | 4 | 0 | 3 |
| CLHC1 | RIBC1 | 0.571996 | 3 | 0 | 3 |
| CLHC1 | ZNF589 | 0.559533 | 4 | 0 | 3 |
| CLHC1 | ZNF763 | 0.558643 | 4 | 0 | 3 |
For details and further investigation, click here
