| Full name: cyclic nucleotide binding domain containing 2 | Alias Symbol: dJ954P9.1 | ||
| Type: protein-coding gene | Cytoband: 20q11.23 | ||
| Entrez ID: 140894 | HGNC ID: HGNC:16145 | Ensembl Gene: ENSG00000149646 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CNBD2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CNBD2 | 140894 | 1552686_at | -0.2315 | 0.3403 | |
| GSE26886 | CNBD2 | 140894 | 1552686_at | -0.3743 | 0.0111 | |
| GSE45670 | CNBD2 | 140894 | 1552686_at | 0.0641 | 0.6344 | |
| GSE53622 | CNBD2 | 140894 | 91209 | 0.3398 | 0.0000 | |
| GSE53624 | CNBD2 | 140894 | 91209 | 0.4603 | 0.0000 | |
| GSE63941 | CNBD2 | 140894 | 1552686_at | -0.0138 | 0.9102 | |
| GSE77861 | CNBD2 | 140894 | 1552686_at | -0.0299 | 0.8599 | |
| SRP133303 | CNBD2 | 140894 | RNAseq | 0.1524 | 0.5691 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CNBD2 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CNBD2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CNBD2 | 140894 | 14 | 1 | 15 | |
| GSE20123 | CNBD2 | 140894 | 14 | 1 | 15 | |
| GSE43470 | CNBD2 | 140894 | 12 | 0 | 31 | |
| GSE46452 | CNBD2 | 140894 | 29 | 0 | 30 | |
| GSE47630 | CNBD2 | 140894 | 25 | 0 | 15 | |
| GSE54993 | CNBD2 | 140894 | 0 | 17 | 53 | |
| GSE54994 | CNBD2 | 140894 | 24 | 0 | 29 | |
| GSE60625 | CNBD2 | 140894 | 0 | 0 | 11 | |
| GSE74703 | CNBD2 | 140894 | 11 | 0 | 25 | |
| GSE74704 | CNBD2 | 140894 | 10 | 0 | 10 | |
| TCGA | CNBD2 | 140894 | 49 | 3 | 44 |
Total number of gains: 188; Total number of losses: 22; Total Number of normals: 278.
Somatic mutations of CNBD2:
Generating mutation plots.
Highly correlated genes for CNBD2:
Showing top 20/42 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CNBD2 | EDA2R | 0.68876 | 3 | 0 | 3 |
| CNBD2 | FANCD2OS | 0.677806 | 3 | 0 | 3 |
| CNBD2 | ANHX | 0.665918 | 4 | 0 | 4 |
| CNBD2 | PRSS58 | 0.654987 | 3 | 0 | 3 |
| CNBD2 | CDH22 | 0.652359 | 3 | 0 | 3 |
| CNBD2 | LRRC43 | 0.647745 | 5 | 0 | 5 |
| CNBD2 | KLK4 | 0.631921 | 3 | 0 | 3 |
| CNBD2 | C17orf78 | 0.625181 | 3 | 0 | 3 |
| CNBD2 | CNR2 | 0.625046 | 4 | 0 | 3 |
| CNBD2 | ANKUB1 | 0.624354 | 3 | 0 | 3 |
| CNBD2 | SLAMF1 | 0.619238 | 3 | 0 | 3 |
| CNBD2 | NPHP3-AS1 | 0.61485 | 3 | 0 | 3 |
| CNBD2 | LINC01260 | 0.609119 | 3 | 0 | 3 |
| CNBD2 | LINC00906 | 0.604511 | 3 | 0 | 3 |
| CNBD2 | TAS1R1 | 0.599706 | 3 | 0 | 3 |
| CNBD2 | LINC00557 | 0.597181 | 4 | 0 | 3 |
| CNBD2 | FATE1 | 0.594745 | 4 | 0 | 3 |
| CNBD2 | OR51M1 | 0.594321 | 3 | 0 | 3 |
| CNBD2 | CDX4 | 0.58947 | 4 | 0 | 3 |
| CNBD2 | CRISP1 | 0.586864 | 3 | 0 | 3 |
For details and further investigation, click here
