| Full name: long intergenic non-protein coding RNA 906 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 19q12 | ||
| Entrez ID: 148145 | HGNC ID: HGNC:27121 | Ensembl Gene: ENSG00000267339 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00906:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00906 | 148145 | 1557550_at | -0.0397 | 0.8829 | |
| GSE26886 | LINC00906 | 148145 | 1557550_at | -0.2183 | 0.0980 | |
| GSE45670 | LINC00906 | 148145 | 1557550_at | 0.0173 | 0.8718 | |
| GSE53622 | LINC00906 | 148145 | 9139 | 0.1924 | 0.2821 | |
| GSE53624 | LINC00906 | 148145 | 45567 | 0.7479 | 0.0000 | |
| GSE63941 | LINC00906 | 148145 | 1557550_at | -0.2003 | 0.1181 | |
| GSE77861 | LINC00906 | 148145 | 1557550_at | -0.2166 | 0.1451 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00906 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00906:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00906 | 148145 | 6 | 7 | 17 | |
| GSE20123 | LINC00906 | 148145 | 6 | 6 | 18 | |
| GSE43470 | LINC00906 | 148145 | 6 | 6 | 31 | |
| GSE46452 | LINC00906 | 148145 | 47 | 1 | 11 | |
| GSE47630 | LINC00906 | 148145 | 8 | 6 | 26 | |
| GSE54993 | LINC00906 | 148145 | 17 | 3 | 50 | |
| GSE54994 | LINC00906 | 148145 | 7 | 11 | 35 | |
| GSE60625 | LINC00906 | 148145 | 9 | 0 | 2 | |
| GSE74703 | LINC00906 | 148145 | 6 | 4 | 26 | |
| GSE74704 | LINC00906 | 148145 | 5 | 4 | 11 | |
| TCGA | LINC00906 | 148145 | 18 | 13 | 65 |
Total number of gains: 135; Total number of losses: 61; Total Number of normals: 292.
Somatic mutations of LINC00906:
Generating mutation plots.
Highly correlated genes for LINC00906:
Showing top 20/89 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00906 | RS1 | 0.719632 | 3 | 0 | 3 |
| LINC00906 | LINC01226 | 0.682645 | 4 | 0 | 3 |
| LINC00906 | PDYN | 0.660599 | 3 | 0 | 3 |
| LINC00906 | TAS2R41 | 0.648982 | 3 | 0 | 3 |
| LINC00906 | TEX26-AS1 | 0.643927 | 3 | 0 | 3 |
| LINC00906 | PRRX2-AS1 | 0.642632 | 4 | 0 | 3 |
| LINC00906 | CPLX3 | 0.642455 | 3 | 0 | 3 |
| LINC00906 | TTYH1 | 0.642071 | 3 | 0 | 3 |
| LINC00906 | MEG3 | 0.639582 | 3 | 0 | 3 |
| LINC00906 | CCDC54 | 0.63158 | 3 | 0 | 3 |
| LINC00906 | FAM181A-AS1 | 0.627312 | 4 | 0 | 4 |
| LINC00906 | KIAA1614 | 0.62601 | 4 | 0 | 3 |
| LINC00906 | PNLIP | 0.624477 | 3 | 0 | 3 |
| LINC00906 | RBP5 | 0.621634 | 3 | 0 | 3 |
| LINC00906 | TIAF1 | 0.613385 | 3 | 0 | 3 |
| LINC00906 | GALNT9 | 0.606021 | 4 | 0 | 3 |
| LINC00906 | CLRN1-AS1 | 0.605246 | 4 | 0 | 3 |
| LINC00906 | CNBD2 | 0.604511 | 3 | 0 | 3 |
| LINC00906 | ZMAT4 | 0.599819 | 3 | 0 | 3 |
| LINC00906 | DNAH7 | 0.593611 | 4 | 0 | 4 |
For details and further investigation, click here
