| Full name: chromosome 17 open reading frame 78 | Alias Symbol: FLJ39647 | ||
| Type: protein-coding gene | Cytoband: 17q12 | ||
| Entrez ID: 284099 | HGNC ID: HGNC:26831 | Ensembl Gene: ENSG00000278505 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C17orf78:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C17orf78 | 284099 | 1553486_a_at | -0.1352 | 0.5105 | |
| GSE26886 | C17orf78 | 284099 | 1553486_a_at | -0.0796 | 0.5186 | |
| GSE45670 | C17orf78 | 284099 | 1553486_a_at | -0.0538 | 0.6080 | |
| GSE53622 | C17orf78 | 284099 | 112497 | 0.3886 | 0.0108 | |
| GSE53624 | C17orf78 | 284099 | 112497 | 0.4565 | 0.0000 | |
| GSE63941 | C17orf78 | 284099 | 1553486_a_at | 0.1376 | 0.2436 | |
| GSE77861 | C17orf78 | 284099 | 1553486_a_at | -0.1303 | 0.2512 | |
| SRP133303 | C17orf78 | 284099 | RNAseq | -0.3417 | 0.3055 | |
| TCGA | C17orf78 | 284099 | RNAseq | 1.0345 | 0.0861 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C17orf78 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C17orf78:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C17orf78 | 284099 | 6 | 1 | 23 | |
| GSE20123 | C17orf78 | 284099 | 6 | 1 | 23 | |
| GSE43470 | C17orf78 | 284099 | 1 | 2 | 40 | |
| GSE46452 | C17orf78 | 284099 | 35 | 0 | 24 | |
| GSE47630 | C17orf78 | 284099 | 8 | 1 | 31 | |
| GSE54993 | C17orf78 | 284099 | 3 | 3 | 64 | |
| GSE54994 | C17orf78 | 284099 | 9 | 5 | 39 | |
| GSE60625 | C17orf78 | 284099 | 4 | 0 | 7 | |
| GSE74703 | C17orf78 | 284099 | 1 | 1 | 34 | |
| GSE74704 | C17orf78 | 284099 | 3 | 1 | 16 | |
| TCGA | C17orf78 | 284099 | 20 | 9 | 67 |
Total number of gains: 96; Total number of losses: 24; Total Number of normals: 368.
Somatic mutations of C17orf78:
Generating mutation plots.
Highly correlated genes for C17orf78:
Showing top 20/42 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C17orf78 | ISX | 0.719912 | 3 | 0 | 3 |
| C17orf78 | PRPH2 | 0.668418 | 3 | 0 | 3 |
| C17orf78 | CCDC36 | 0.635241 | 3 | 0 | 3 |
| C17orf78 | CNBD2 | 0.625181 | 3 | 0 | 3 |
| C17orf78 | ZNF554 | 0.604236 | 3 | 0 | 3 |
| C17orf78 | LINC00454 | 0.596493 | 3 | 0 | 3 |
| C17orf78 | PDYN | 0.585277 | 3 | 0 | 3 |
| C17orf78 | OR1J4 | 0.580179 | 3 | 0 | 3 |
| C17orf78 | UCP1 | 0.579646 | 3 | 0 | 3 |
| C17orf78 | LMNTD1 | 0.578536 | 4 | 0 | 3 |
| C17orf78 | A1CF | 0.577932 | 4 | 0 | 4 |
| C17orf78 | FGA | 0.577204 | 4 | 0 | 3 |
| C17orf78 | TAS1R1 | 0.575928 | 3 | 0 | 3 |
| C17orf78 | TXNDC2 | 0.568136 | 3 | 0 | 3 |
| C17orf78 | CNR2 | 0.566528 | 4 | 0 | 3 |
| C17orf78 | FOXN4 | 0.565526 | 3 | 0 | 3 |
| C17orf78 | RETN | 0.56146 | 3 | 0 | 3 |
| C17orf78 | DEFB118 | 0.560656 | 4 | 0 | 3 |
| C17orf78 | KLK4 | 0.559039 | 4 | 0 | 3 |
| C17orf78 | TTTY11 | 0.55606 | 4 | 0 | 3 |
For details and further investigation, click here
