| Full name: CUB and Sushi multiple domains 1 | Alias Symbol: KIAA1890|PPP1R24 | ||
| Type: protein-coding gene | Cytoband: 8p23.2 | ||
| Entrez ID: 64478 | HGNC ID: HGNC:14026 | Ensembl Gene: ENSG00000183117 | OMIM ID: 608397 |
| Drug and gene relationship at DGIdb | |||
Expression of CSMD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CSMD1 | 64478 | 1553405_a_at | -0.3380 | 0.2342 | |
| GSE26886 | CSMD1 | 64478 | 241960_at | 0.2047 | 0.1476 | |
| GSE45670 | CSMD1 | 64478 | 1562330_s_at | 0.0615 | 0.5134 | |
| GSE53622 | CSMD1 | 64478 | 3681 | -0.4078 | 0.0262 | |
| GSE53624 | CSMD1 | 64478 | 3681 | -0.7910 | 0.0000 | |
| GSE63941 | CSMD1 | 64478 | 1562330_s_at | 0.0338 | 0.8794 | |
| GSE77861 | CSMD1 | 64478 | 1553405_a_at | -0.3075 | 0.0189 | |
| SRP133303 | CSMD1 | 64478 | RNAseq | -1.1264 | 0.0347 | |
| SRP159526 | CSMD1 | 64478 | RNAseq | 3.2278 | 0.0004 | |
| TCGA | CSMD1 | 64478 | RNAseq | 0.3943 | 0.5625 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by CSMD1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CSMD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CSMD1 | 64478 | 4 | 16 | 10 | |
| GSE20123 | CSMD1 | 64478 | 5 | 15 | 10 | |
| GSE43470 | CSMD1 | 64478 | 6 | 11 | 26 | |
| GSE46452 | CSMD1 | 64478 | 12 | 14 | 33 | |
| GSE47630 | CSMD1 | 64478 | 10 | 11 | 19 | |
| GSE54993 | CSMD1 | 64478 | 4 | 14 | 52 | |
| GSE54994 | CSMD1 | 64478 | 9 | 20 | 24 | |
| GSE60625 | CSMD1 | 64478 | 3 | 0 | 8 | |
| GSE74703 | CSMD1 | 64478 | 6 | 9 | 21 | |
| GSE74704 | CSMD1 | 64478 | 4 | 10 | 6 | |
| TCGA | CSMD1 | 64478 | 15 | 57 | 24 |
Total number of gains: 78; Total number of losses: 177; Total Number of normals: 233.
Somatic mutations of CSMD1:
Generating mutation plots.
Highly correlated genes for CSMD1:
Showing top 20/28 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CSMD1 | MCHR2 | 0.678597 | 3 | 0 | 3 |
| CSMD1 | NAV2-AS5 | 0.668301 | 3 | 0 | 3 |
| CSMD1 | FUT6 | 0.647236 | 3 | 0 | 3 |
| CSMD1 | SYAP1 | 0.637086 | 3 | 0 | 3 |
| CSMD1 | USP54 | 0.63612 | 3 | 0 | 3 |
| CSMD1 | C20orf173 | 0.616532 | 3 | 0 | 3 |
| CSMD1 | PADI4 | 0.615443 | 3 | 0 | 3 |
| CSMD1 | HTR3C | 0.605946 | 3 | 0 | 3 |
| CSMD1 | RER1 | 0.597258 | 3 | 0 | 3 |
| CSMD1 | C3orf35 | 0.594162 | 3 | 0 | 3 |
| CSMD1 | LINC00327 | 0.588142 | 3 | 0 | 3 |
| CSMD1 | RTP5 | 0.584801 | 3 | 0 | 3 |
| CSMD1 | SLC26A7 | 0.576706 | 4 | 0 | 3 |
| CSMD1 | CHRNA2 | 0.575548 | 3 | 0 | 3 |
| CSMD1 | BARX2 | 0.569013 | 3 | 0 | 3 |
| CSMD1 | OR2J3 | 0.565129 | 3 | 0 | 3 |
| CSMD1 | RLBP1 | 0.549219 | 4 | 0 | 3 |
| CSMD1 | LELP1 | 0.546811 | 4 | 0 | 3 |
| CSMD1 | INSRR | 0.543762 | 3 | 0 | 3 |
| CSMD1 | SPATA9 | 0.541709 | 3 | 0 | 3 |
For details and further investigation, click here
