| Full name: chromosome 20 open reading frame 173 | Alias Symbol: dJ477O4.4 | ||
| Type: protein-coding gene | Cytoband: 20q11.22 | ||
| Entrez ID: 140873 | HGNC ID: HGNC:16166 | Ensembl Gene: ENSG00000125975 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C20orf173:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C20orf173 | 140873 | 233143_at | -0.3617 | 0.1879 | |
| GSE26886 | C20orf173 | 140873 | 233143_at | 0.0760 | 0.5718 | |
| GSE45670 | C20orf173 | 140873 | 233143_at | 0.0130 | 0.9129 | |
| GSE53622 | C20orf173 | 140873 | 140920 | 0.1425 | 0.0540 | |
| GSE53624 | C20orf173 | 140873 | 140920 | -0.0242 | 0.8069 | |
| GSE63941 | C20orf173 | 140873 | 233143_at | -0.0373 | 0.7988 | |
| GSE77861 | C20orf173 | 140873 | 233143_at | -0.2129 | 0.0370 | |
| GSE97050 | C20orf173 | 140873 | A_23_P57248 | -0.2864 | 0.2536 | |
| TCGA | C20orf173 | 140873 | RNAseq | 1.9190 | 0.1000 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C20orf173 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C20orf173:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C20orf173 | 140873 | 15 | 1 | 14 | |
| GSE20123 | C20orf173 | 140873 | 15 | 1 | 14 | |
| GSE43470 | C20orf173 | 140873 | 13 | 0 | 30 | |
| GSE46452 | C20orf173 | 140873 | 29 | 0 | 30 | |
| GSE47630 | C20orf173 | 140873 | 25 | 0 | 15 | |
| GSE54993 | C20orf173 | 140873 | 0 | 17 | 53 | |
| GSE54994 | C20orf173 | 140873 | 24 | 0 | 29 | |
| GSE60625 | C20orf173 | 140873 | 0 | 0 | 11 | |
| GSE74703 | C20orf173 | 140873 | 11 | 0 | 25 | |
| GSE74704 | C20orf173 | 140873 | 11 | 0 | 9 | |
| TCGA | C20orf173 | 140873 | 49 | 3 | 44 |
Total number of gains: 192; Total number of losses: 22; Total Number of normals: 274.
Somatic mutations of C20orf173:
Generating mutation plots.
Highly correlated genes for C20orf173:
Showing top 20/376 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C20orf173 | CRTAC1 | 0.820811 | 3 | 0 | 3 |
| C20orf173 | KLHL10 | 0.806692 | 3 | 0 | 3 |
| C20orf173 | RGL4 | 0.80657 | 3 | 0 | 3 |
| C20orf173 | ROM1 | 0.770744 | 4 | 0 | 4 |
| C20orf173 | KRT32 | 0.766212 | 3 | 0 | 3 |
| C20orf173 | C1orf61 | 0.76424 | 3 | 0 | 3 |
| C20orf173 | TUBA8 | 0.758796 | 4 | 0 | 3 |
| C20orf173 | ABLIM3 | 0.755269 | 3 | 0 | 3 |
| C20orf173 | FAM171A2 | 0.752582 | 4 | 0 | 4 |
| C20orf173 | GAB2 | 0.747499 | 3 | 0 | 3 |
| C20orf173 | PHOSPHO1 | 0.743547 | 3 | 0 | 3 |
| C20orf173 | SCARA5 | 0.736261 | 3 | 0 | 3 |
| C20orf173 | KIF6 | 0.733915 | 3 | 0 | 3 |
| C20orf173 | PMM1 | 0.730865 | 3 | 0 | 3 |
| C20orf173 | CACNG8 | 0.728705 | 5 | 0 | 5 |
| C20orf173 | MYO1A | 0.72709 | 4 | 0 | 3 |
| C20orf173 | FRMPD1 | 0.726164 | 3 | 0 | 3 |
| C20orf173 | SLC7A14 | 0.725223 | 3 | 0 | 3 |
| C20orf173 | BBOX1 | 0.724771 | 3 | 0 | 3 |
| C20orf173 | ABCC8 | 0.724113 | 5 | 0 | 4 |
For details and further investigation, click here
