| Full name: spermatogenesis associated 9 | Alias Symbol: NYD-SP16|FLJ35906 | ||
| Type: protein-coding gene | Cytoband: 5q15 | ||
| Entrez ID: 83890 | HGNC ID: HGNC:22988 | Ensembl Gene: ENSG00000145757 | OMIM ID: 608039 |
| Drug and gene relationship at DGIdb | |||
Expression of SPATA9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SPATA9 | 83890 | 223840_s_at | 0.0502 | 0.8971 | |
| GSE26886 | SPATA9 | 83890 | 223840_s_at | 0.1362 | 0.1266 | |
| GSE45670 | SPATA9 | 83890 | 223840_s_at | 0.0157 | 0.8600 | |
| GSE53622 | SPATA9 | 83890 | 8209 | 0.1246 | 0.3221 | |
| GSE53624 | SPATA9 | 83890 | 8209 | 0.6422 | 0.0000 | |
| GSE63941 | SPATA9 | 83890 | 223840_s_at | -2.0640 | 0.0001 | |
| GSE77861 | SPATA9 | 83890 | 223840_s_at | -0.0436 | 0.6707 | |
| GSE97050 | SPATA9 | 83890 | A_33_P3299000 | -0.0612 | 0.8567 | |
| SRP133303 | SPATA9 | 83890 | RNAseq | 0.1204 | 0.6679 | |
| SRP159526 | SPATA9 | 83890 | RNAseq | 0.6327 | 0.2155 | |
| SRP219564 | SPATA9 | 83890 | RNAseq | 0.4432 | 0.3328 | |
| TCGA | SPATA9 | 83890 | RNAseq | -0.0563 | 0.8335 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by SPATA9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SPATA9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SPATA9 | 83890 | 1 | 13 | 16 | |
| GSE20123 | SPATA9 | 83890 | 1 | 13 | 16 | |
| GSE43470 | SPATA9 | 83890 | 3 | 9 | 31 | |
| GSE46452 | SPATA9 | 83890 | 0 | 28 | 31 | |
| GSE47630 | SPATA9 | 83890 | 0 | 20 | 20 | |
| GSE54993 | SPATA9 | 83890 | 8 | 1 | 61 | |
| GSE54994 | SPATA9 | 83890 | 1 | 18 | 34 | |
| GSE60625 | SPATA9 | 83890 | 0 | 0 | 11 | |
| GSE74703 | SPATA9 | 83890 | 2 | 7 | 27 | |
| GSE74704 | SPATA9 | 83890 | 1 | 7 | 12 | |
| TCGA | SPATA9 | 83890 | 3 | 44 | 49 |
Total number of gains: 20; Total number of losses: 160; Total Number of normals: 308.
Somatic mutations of SPATA9:
Generating mutation plots.
Highly correlated genes for SPATA9:
Showing top 20/302 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SPATA9 | SVEP1 | 0.777373 | 3 | 0 | 3 |
| SPATA9 | CCL2 | 0.776382 | 3 | 0 | 3 |
| SPATA9 | ANGPT1 | 0.770413 | 3 | 0 | 3 |
| SPATA9 | ANGPTL2 | 0.766351 | 3 | 0 | 3 |
| SPATA9 | PKD2 | 0.758364 | 3 | 0 | 3 |
| SPATA9 | LIN7A | 0.758166 | 3 | 0 | 3 |
| SPATA9 | GFRA1 | 0.750847 | 3 | 0 | 3 |
| SPATA9 | TNFAIP6 | 0.745913 | 4 | 0 | 4 |
| SPATA9 | PEAK1 | 0.741782 | 3 | 0 | 3 |
| SPATA9 | FGF7 | 0.740515 | 3 | 0 | 3 |
| SPATA9 | AFF3 | 0.738849 | 3 | 0 | 3 |
| SPATA9 | PARD3B | 0.736323 | 3 | 0 | 3 |
| SPATA9 | CLMP | 0.72252 | 4 | 0 | 3 |
| SPATA9 | SRP72 | 0.718654 | 3 | 0 | 3 |
| SPATA9 | PRKD1 | 0.717387 | 3 | 0 | 3 |
| SPATA9 | UXS1 | 0.717231 | 3 | 0 | 3 |
| SPATA9 | BDNF | 0.716941 | 3 | 0 | 3 |
| SPATA9 | ST6GALNAC3 | 0.715237 | 3 | 0 | 3 |
| SPATA9 | ENOX1 | 0.71414 | 4 | 0 | 3 |
| SPATA9 | KIAA1109 | 0.711645 | 3 | 0 | 3 |
For details and further investigation, click here
