DMBX1

 

Full name: diencephalon/mesencephalon homeobox 1 Alias Symbol: PAXB
Type: protein-coding gene Cytoband: 1p33
Entrez ID: 127343 HGNC ID: HGNC:19026 Ensembl Gene: ENSG00000197587 OMIM ID: 607410
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of DMBX1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DMBX1 127343 234776_at -0.0840 0.7750
GSE26886 DMBX1 127343 234776_at 0.0921 0.3020
GSE45670 DMBX1 127343 234776_at 0.0399 0.5849
GSE53622 DMBX1 127343 27993 0.3774 0.0003
GSE53624 DMBX1 127343 27993 0.6433 0.0000
GSE63941 DMBX1 127343 234776_at 0.1287 0.3493
GSE77861 DMBX1 127343 234776_at -0.1183 0.2251
GSE97050 DMBX1 127343 A_23_P500542 -0.1785 0.6473
SRP133303 DMBX1 127343 RNAseq 1.1175 0.0017
SRP219564 DMBX1 127343 RNAseq 3.5480 0.0001
TCGA DMBX1 127343 RNAseq 4.6166 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by DMBX1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DMBX1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DMBX1 127343 4 3 23
GSE20123 DMBX1 127343 4 2 24
GSE43470 DMBX1 127343 5 1 37
GSE46452 DMBX1 127343 2 1 56
GSE47630 DMBX1 127343 8 4 28
GSE54993 DMBX1 127343 0 1 69
GSE54994 DMBX1 127343 11 2 40
GSE60625 DMBX1 127343 0 0 11
GSE74703 DMBX1 127343 4 1 31
GSE74704 DMBX1 127343 2 0 18
TCGA DMBX1 127343 10 17 69

Total number of gains: 50; Total number of losses: 32; Total Number of normals: 406.  


 

Somatic mutations of DMBX1:

 

Generating mutation plots.

 

Highly correlated genes for DMBX1:

 

Showing all 19 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DMBX1RLBP10.72331303
DMBX1CCDC630.595872303
DMBX1DOK60.588324303
DMBX1PATE10.576869303
DMBX1FRMD10.561777403
DMBX1C5orf490.559845303
DMBX1EIF60.552315303
DMBX1SLC9A30.551435403
DMBX1C10orf530.551224503
DMBX1GPR170.550903303
DMBX1VGLL20.550583503
DMBX1CHRM40.537573705
DMBX1SLC25A480.536619403
DMBX1RPL34-AS10.53645303
DMBX1TACR30.532681403
DMBX1FFAR20.526637403
DMBX1RGR0.5181503
DMBX1TP730.515525403
DMBX1TMPRSS60.500072603

For details and further investigation, click here