FAM110B

 

Full name: family with sequence similarity 110 member B Alias Symbol: MGC39325
Type: protein-coding gene Cytoband: 8q12.1
Entrez ID: 90362 HGNC ID: HGNC:28587 Ensembl Gene: ENSG00000169122 OMIM ID: 611394
Drug and gene relationship at DGIdb

 

Expression of FAM110B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM110B 90362 221959_at -0.4727 0.4137
GSE20347 FAM110B 90362 221959_at 0.0271 0.7789
GSE23400 FAM110B 90362 221959_at -0.0816 0.0546
GSE26886 FAM110B 90362 221959_at 0.8103 0.0040
GSE29001 FAM110B 90362 221959_at -0.1500 0.4201
GSE38129 FAM110B 90362 221959_at -0.2234 0.2529
GSE45670 FAM110B 90362 221959_at -0.4101 0.0012
GSE63941 FAM110B 90362 221959_at -2.2456 0.0000
GSE77861 FAM110B 90362 227800_at -0.1778 0.1050
GSE97050 FAM110B 90362 A_33_P3330443 -0.1903 0.5456
SRP064894 FAM110B 90362 RNAseq 0.3293 0.3936
SRP133303 FAM110B 90362 RNAseq -0.3807 0.1801
SRP159526 FAM110B 90362 RNAseq 0.7505 0.0551
SRP219564 FAM110B 90362 RNAseq -0.0325 0.9620
TCGA FAM110B 90362 RNAseq -0.8896 0.0000

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by FAM110B expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM110B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM110B 90362 13 1 16
GSE20123 FAM110B 90362 13 1 16
GSE43470 FAM110B 90362 13 3 27
GSE46452 FAM110B 90362 20 3 36
GSE47630 FAM110B 90362 23 1 16
GSE54993 FAM110B 90362 1 17 52
GSE54994 FAM110B 90362 30 0 23
GSE60625 FAM110B 90362 0 4 7
GSE74703 FAM110B 90362 12 2 22
GSE74704 FAM110B 90362 9 0 11
TCGA FAM110B 90362 44 6 46

Total number of gains: 178; Total number of losses: 38; Total Number of normals: 272.  


 

Somatic mutations of FAM110B:

 

Generating mutation plots.

 

Highly correlated genes for FAM110B:

 

Showing top 20/287 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM110BSCARA50.844112303
FAM110BMAPK8IP10.832617303
FAM110BGALNT150.793946303
FAM110BTCEAL70.783262404
FAM110BSVOPL0.755794303
FAM110BLRTM20.751608303
FAM110BRGL40.749978303
FAM110BATOH80.745844303
FAM110BZNF7810.745559303
FAM110BSLC45A10.740522303
FAM110BZCCHC180.735211504
FAM110BTRIM100.732232303
FAM110BMC3R0.731864303
FAM110BCNTN40.731783404
FAM110BLINC010820.731742303
FAM110BDNM3OS0.723827303
FAM110BGDF150.723157303
FAM110BTSPAN110.716349303
FAM110BBAHCC10.711417404
FAM110BRASGRF20.710658404

For details and further investigation, click here