SLC45A1

 

Full name: solute carrier family 45 member 1 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p36.23
Entrez ID: 50651 HGNC ID: HGNC:17939 Ensembl Gene: ENSG00000162426 OMIM ID: 605763
Drug and gene relationship at DGIdb

 

Expression of SLC45A1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC45A1 50651 230458_at -0.4311 0.4710
GSE26886 SLC45A1 50651 230458_at 0.3655 0.0129
GSE45670 SLC45A1 50651 230458_at -0.3186 0.0004
GSE53622 SLC45A1 50651 13017 -0.8553 0.0000
GSE53624 SLC45A1 50651 13017 -0.7210 0.0000
GSE63941 SLC45A1 50651 230458_at -0.7354 0.0057
GSE77861 SLC45A1 50651 230458_at -0.0582 0.6893
SRP133303 SLC45A1 50651 RNAseq -0.3263 0.4275
SRP159526 SLC45A1 50651 RNAseq -0.0918 0.8910
SRP219564 SLC45A1 50651 RNAseq -0.0369 0.9646
TCGA SLC45A1 50651 RNAseq -0.9527 0.0010

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SLC45A1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC45A1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC45A1 50651 1 5 24
GSE20123 SLC45A1 50651 1 3 26
GSE43470 SLC45A1 50651 6 5 32
GSE46452 SLC45A1 50651 7 1 51
GSE47630 SLC45A1 50651 8 4 28
GSE54993 SLC45A1 50651 3 2 65
GSE54994 SLC45A1 50651 13 3 37
GSE60625 SLC45A1 50651 0 0 11
GSE74703 SLC45A1 50651 5 3 28
GSE74704 SLC45A1 50651 1 0 19
TCGA SLC45A1 50651 11 23 62

Total number of gains: 56; Total number of losses: 49; Total Number of normals: 383.  


 

Somatic mutations of SLC45A1:

 

Generating mutation plots.

 

Highly correlated genes for SLC45A1:

 

Showing top 20/326 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC45A1SPOCK10.807423303
SLC45A1FAM110B0.740522303
SLC45A1DCHS10.73131303
SLC45A1MICAL20.730378303
SLC45A1LY6H0.724548303
SLC45A1SYDE10.72353303
SLC45A1RASA30.712547303
SLC45A1FKBP70.709232303
SLC45A1STX20.700482303
SLC45A1PRKG10.695522403
SLC45A1DSEL0.684012303
SLC45A1PEG3-AS10.682682303
SLC45A1ITGB1BP20.675574303
SLC45A1PDE4A0.673207303
SLC45A1NFASC0.672901403
SLC45A1TMOD10.663199303
SLC45A1COLGALT20.663165303
SLC45A1IGIP0.659485303
SLC45A1CTSF0.653665303
SLC45A1RGS30.653653303

For details and further investigation, click here