| Full name: long intergenic non-protein coding RNA 1082 | Alias Symbol: TCONS_00024492 | ||
| Type: non-coding RNA | Cytoband: 16q24.1 | ||
| Entrez ID: 100506542 | HGNC ID: HGNC:49125 | Ensembl Gene: ENSG00000269186 | OMIM ID: 614978 |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01082:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01082 | 100506542 | 231580_at | -0.7616 | 0.0357 | |
| GSE26886 | LINC01082 | 100506542 | 231580_at | 0.2323 | 0.0637 | |
| GSE45670 | LINC01082 | 100506542 | 231580_at | -1.2782 | 0.0000 | |
| GSE53622 | LINC01082 | 100506542 | 111380 | -2.7587 | 0.0000 | |
| GSE53624 | LINC01082 | 100506542 | 111380 | -3.3321 | 0.0000 | |
| GSE63941 | LINC01082 | 100506542 | 231580_at | -3.2572 | 0.0000 | |
| GSE77861 | LINC01082 | 100506542 | 231580_at | 0.0208 | 0.9022 | |
| SRP064894 | LINC01082 | 100506542 | RNAseq | -3.3710 | 0.0000 | |
| SRP133303 | LINC01082 | 100506542 | RNAseq | -1.8745 | 0.0001 | |
| SRP159526 | LINC01082 | 100506542 | RNAseq | -1.5743 | 0.0200 | |
| SRP219564 | LINC01082 | 100506542 | RNAseq | -1.8020 | 0.0981 |
Upregulated datasets: 0; Downregulated datasets: 7.
Survival by LINC01082 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01082:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01082 | 100506542 | 3 | 3 | 24 | |
| GSE20123 | LINC01082 | 100506542 | 3 | 3 | 24 | |
| GSE43470 | LINC01082 | 100506542 | 2 | 11 | 30 | |
| GSE46452 | LINC01082 | 100506542 | 38 | 1 | 20 | |
| GSE47630 | LINC01082 | 100506542 | 11 | 9 | 20 | |
| GSE54993 | LINC01082 | 100506542 | 3 | 4 | 63 | |
| GSE54994 | LINC01082 | 100506542 | 9 | 11 | 33 | |
| GSE60625 | LINC01082 | 100506542 | 4 | 0 | 7 | |
| GSE74703 | LINC01082 | 100506542 | 1 | 8 | 27 | |
| GSE74704 | LINC01082 | 100506542 | 2 | 2 | 16 |
Total number of gains: 76; Total number of losses: 52; Total Number of normals: 264.
Somatic mutations of LINC01082:
Generating mutation plots.
Highly correlated genes for LINC01082:
Showing top 20/752 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01082 | ASPA | 0.895327 | 5 | 0 | 5 |
| LINC01082 | TCF21 | 0.892922 | 5 | 0 | 5 |
| LINC01082 | GREM2 | 0.887224 | 5 | 0 | 5 |
| LINC01082 | RCAN2 | 0.884078 | 5 | 0 | 5 |
| LINC01082 | TMEM100 | 0.878233 | 5 | 0 | 5 |
| LINC01082 | CNTN4 | 0.873863 | 3 | 0 | 3 |
| LINC01082 | MFAP4 | 0.861383 | 5 | 0 | 5 |
| LINC01082 | NEGR1 | 0.861107 | 5 | 0 | 5 |
| LINC01082 | LGI1 | 0.857127 | 4 | 0 | 4 |
| LINC01082 | C1QTNF7 | 0.840706 | 4 | 0 | 4 |
| LINC01082 | FHL5 | 0.840383 | 4 | 0 | 4 |
| LINC01082 | PGM5-AS1 | 0.839759 | 3 | 0 | 3 |
| LINC01082 | PCP4 | 0.839536 | 4 | 0 | 4 |
| LINC01082 | PEG3 | 0.83572 | 3 | 0 | 3 |
| LINC01082 | GFRA1 | 0.834829 | 5 | 0 | 5 |
| LINC01082 | CXCL12 | 0.834104 | 5 | 0 | 5 |
| LINC01082 | LMOD1 | 0.831607 | 5 | 0 | 5 |
| LINC01082 | LINC01279 | 0.828048 | 3 | 0 | 3 |
| LINC01082 | SYNPO2 | 0.812106 | 5 | 0 | 5 |
| LINC01082 | AFF3 | 0.807753 | 3 | 0 | 3 |
For details and further investigation, click here
