GOLPH3L

 

Full name: golgi phosphoprotein 3 like Alias Symbol: GPP34R
Type: protein-coding gene Cytoband: 1q21.3
Entrez ID: 55204 HGNC ID: HGNC:24882 Ensembl Gene: ENSG00000143457 OMIM ID: 612208
Drug and gene relationship at DGIdb

 

Expression of GOLPH3L:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GOLPH3L 55204 218361_at -0.5285 0.4023
GSE20347 GOLPH3L 55204 218361_at -0.9568 0.0000
GSE23400 GOLPH3L 55204 218361_at -0.5975 0.0000
GSE26886 GOLPH3L 55204 218361_at -1.8114 0.0000
GSE29001 GOLPH3L 55204 218361_at -0.9700 0.0041
GSE38129 GOLPH3L 55204 218361_at -0.8110 0.0000
GSE45670 GOLPH3L 55204 218361_at -0.4484 0.0556
GSE53622 GOLPH3L 55204 86510 -1.1636 0.0000
GSE53624 GOLPH3L 55204 86510 -1.1093 0.0000
GSE63941 GOLPH3L 55204 218361_at 0.4173 0.4429
GSE77861 GOLPH3L 55204 218361_at -0.8198 0.0021
GSE97050 GOLPH3L 55204 A_24_P345377 -0.9933 0.0762
SRP007169 GOLPH3L 55204 RNAseq -2.3551 0.0000
SRP008496 GOLPH3L 55204 RNAseq -2.4548 0.0000
SRP064894 GOLPH3L 55204 RNAseq -1.5043 0.0000
SRP133303 GOLPH3L 55204 RNAseq -0.8059 0.0001
SRP159526 GOLPH3L 55204 RNAseq -0.7765 0.0001
SRP193095 GOLPH3L 55204 RNAseq -1.0876 0.0000
SRP219564 GOLPH3L 55204 RNAseq -0.9841 0.0196
TCGA GOLPH3L 55204 RNAseq -0.1927 0.0006

Upregulated datasets: 0; Downregulated datasets: 7.  


 

Survival by GOLPH3L expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GOLPH3L:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GOLPH3L 55204 15 0 15
GSE20123 GOLPH3L 55204 15 0 15
GSE43470 GOLPH3L 55204 6 1 36
GSE46452 GOLPH3L 55204 2 1 56
GSE47630 GOLPH3L 55204 14 0 26
GSE54993 GOLPH3L 55204 0 3 67
GSE54994 GOLPH3L 55204 15 0 38
GSE60625 GOLPH3L 55204 0 0 11
GSE74703 GOLPH3L 55204 6 1 29
GSE74704 GOLPH3L 55204 7 0 13
TCGA GOLPH3L 55204 38 2 56

Total number of gains: 118; Total number of losses: 8; Total Number of normals: 362.  


 

Somatic mutations of GOLPH3L:

 

Generating mutation plots.

 

Highly correlated genes for GOLPH3L:

 

Showing top 20/1689 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GOLPH3LZCCHC90.817017303
GOLPH3LUBE2D20.78198303
GOLPH3LCA130.781473303
GOLPH3LSLC10A50.7762303
GOLPH3LMPP70.77209606
GOLPH3LALDH9A10.77197911011
GOLPH3LHPGD0.77150811010
GOLPH3LRBM200.768835404
GOLPH3LUBL30.76467810010
GOLPH3LEHD30.76401811011
GOLPH3LRMND5B0.76089811011
GOLPH3LSORT10.75976811010
GOLPH3LCYP2J20.75795410010
GOLPH3LTMEM2340.757145303
GOLPH3LULK30.746954707
GOLPH3LPAQR80.746625707
GOLPH3LPLEKHA70.745337808
GOLPH3LCTTNBP2NL0.743383606
GOLPH3LEIF4E30.741965606
GOLPH3LMGST20.74051811011

For details and further investigation, click here