| Full name: germ cell associated 1 | Alias Symbol: MGC3146 | ||
| Type: protein-coding gene | Cytoband: 12p13.1 | ||
| Entrez ID: 83445 | HGNC ID: HGNC:19716 | Ensembl Gene: ENSG00000111305 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of GSG1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GSG1 | 83445 | 221252_s_at | -0.1721 | 0.5205 | |
| GSE20347 | GSG1 | 83445 | 221252_s_at | -0.2054 | 0.0002 | |
| GSE23400 | GSG1 | 83445 | 221252_s_at | -0.1019 | 0.0001 | |
| GSE26886 | GSG1 | 83445 | 221252_s_at | 0.0146 | 0.8919 | |
| GSE29001 | GSG1 | 83445 | 221252_s_at | -0.2252 | 0.0252 | |
| GSE38129 | GSG1 | 83445 | 221252_s_at | -0.1877 | 0.0008 | |
| GSE45670 | GSG1 | 83445 | 221252_s_at | -0.0248 | 0.8568 | |
| GSE53622 | GSG1 | 83445 | 140147 | -0.0149 | 0.8873 | |
| GSE53624 | GSG1 | 83445 | 140147 | -0.4789 | 0.0000 | |
| GSE63941 | GSG1 | 83445 | 221252_s_at | -0.3625 | 0.0019 | |
| GSE77861 | GSG1 | 83445 | 241553_at | -0.1546 | 0.1301 | |
| GSE97050 | GSG1 | 83445 | A_33_P3405285 | 0.5071 | 0.1791 | |
| SRP007169 | GSG1 | 83445 | RNAseq | 0.4677 | 0.4540 | |
| SRP133303 | GSG1 | 83445 | RNAseq | 0.0235 | 0.8887 | |
| SRP159526 | GSG1 | 83445 | RNAseq | 1.2579 | 0.1022 | |
| SRP193095 | GSG1 | 83445 | RNAseq | 0.1871 | 0.2264 | |
| TCGA | GSG1 | 83445 | RNAseq | 1.7941 | 0.1991 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by GSG1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of GSG1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GSG1 | 83445 | 6 | 2 | 22 | |
| GSE20123 | GSG1 | 83445 | 6 | 2 | 22 | |
| GSE43470 | GSG1 | 83445 | 9 | 4 | 30 | |
| GSE46452 | GSG1 | 83445 | 10 | 1 | 48 | |
| GSE47630 | GSG1 | 83445 | 13 | 2 | 25 | |
| GSE54993 | GSG1 | 83445 | 2 | 9 | 59 | |
| GSE54994 | GSG1 | 83445 | 10 | 2 | 41 | |
| GSE60625 | GSG1 | 83445 | 0 | 1 | 10 | |
| GSE74703 | GSG1 | 83445 | 9 | 3 | 24 | |
| GSE74704 | GSG1 | 83445 | 4 | 1 | 15 | |
| TCGA | GSG1 | 83445 | 39 | 7 | 50 |
Total number of gains: 108; Total number of losses: 34; Total Number of normals: 346.
Somatic mutations of GSG1:
Generating mutation plots.
Highly correlated genes for GSG1:
Showing top 20/447 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GSG1 | RSPH9 | 0.711506 | 4 | 0 | 4 |
| GSG1 | GPR152 | 0.690157 | 3 | 0 | 3 |
| GSG1 | DIRC3 | 0.674444 | 3 | 0 | 3 |
| GSG1 | ATP1A4 | 0.668992 | 3 | 0 | 3 |
| GSG1 | DIO3OS | 0.66854 | 4 | 0 | 4 |
| GSG1 | LINC00410 | 0.662717 | 3 | 0 | 3 |
| GSG1 | FAM222A-AS1 | 0.659772 | 3 | 0 | 3 |
| GSG1 | IRGC | 0.651748 | 3 | 0 | 3 |
| GSG1 | ASMT | 0.649821 | 5 | 0 | 4 |
| GSG1 | LAMA5-AS1 | 0.647869 | 3 | 0 | 3 |
| GSG1 | MALRD1 | 0.646591 | 3 | 0 | 3 |
| GSG1 | CA4 | 0.64581 | 5 | 0 | 5 |
| GSG1 | KCTD19 | 0.63932 | 4 | 0 | 4 |
| GSG1 | FAM30A | 0.635072 | 3 | 0 | 3 |
| GSG1 | CPM | 0.63479 | 5 | 0 | 4 |
| GSG1 | ZNF205-AS1 | 0.63439 | 5 | 0 | 5 |
| GSG1 | CD72 | 0.627315 | 5 | 0 | 4 |
| GSG1 | DEFB128 | 0.62271 | 4 | 0 | 4 |
| GSG1 | LINC00486 | 0.621819 | 4 | 0 | 4 |
| GSG1 | GALR3 | 0.618186 | 7 | 0 | 6 |
For details and further investigation, click here
