| Full name: long intergenic non-protein coding RNA 410 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q31.3 | ||
| Entrez ID: 144776 | HGNC ID: HGNC:42742 | Ensembl Gene: ENSG00000231674 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00410:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00410 | 144776 | 1564287_at | -0.0975 | 0.6443 | |
| GSE26886 | LINC00410 | 144776 | 1564287_at | -0.1680 | 0.2864 | |
| GSE45670 | LINC00410 | 144776 | 1564287_at | -0.0585 | 0.5392 | |
| GSE53622 | LINC00410 | 144776 | 59709 | -1.4399 | 0.0000 | |
| GSE53624 | LINC00410 | 144776 | 59709 | -1.5370 | 0.0000 | |
| GSE63941 | LINC00410 | 144776 | 1564287_at | 0.0592 | 0.7139 | |
| GSE77861 | LINC00410 | 144776 | 1564287_at | -0.1357 | 0.2492 | |
| SRP133303 | LINC00410 | 144776 | RNAseq | 0.2674 | 0.1434 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by LINC00410 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00410:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00410 | 144776 | 3 | 13 | 14 | |
| GSE20123 | LINC00410 | 144776 | 3 | 12 | 15 | |
| GSE43470 | LINC00410 | 144776 | 1 | 12 | 30 | |
| GSE46452 | LINC00410 | 144776 | 0 | 32 | 27 | |
| GSE47630 | LINC00410 | 144776 | 3 | 27 | 10 | |
| GSE54993 | LINC00410 | 144776 | 11 | 3 | 56 | |
| GSE54994 | LINC00410 | 144776 | 3 | 14 | 36 | |
| GSE60625 | LINC00410 | 144776 | 0 | 3 | 8 | |
| GSE74703 | LINC00410 | 144776 | 1 | 10 | 25 | |
| GSE74704 | LINC00410 | 144776 | 1 | 11 | 8 | |
| TCGA | LINC00410 | 144776 | 13 | 33 | 50 |
Total number of gains: 39; Total number of losses: 170; Total Number of normals: 279.
Somatic mutations of LINC00410:
Generating mutation plots.
Highly correlated genes for LINC00410:
Showing top 20/301 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00410 | NCR1 | 0.794013 | 3 | 0 | 3 |
| LINC00410 | SFTPB | 0.768851 | 3 | 0 | 3 |
| LINC00410 | VSIG10L | 0.705872 | 3 | 0 | 3 |
| LINC00410 | KLKB1 | 0.704774 | 4 | 0 | 4 |
| LINC00410 | HOPX | 0.70348 | 3 | 0 | 3 |
| LINC00410 | PPP1R27 | 0.703459 | 3 | 0 | 3 |
| LINC00410 | GALNTL5 | 0.701183 | 3 | 0 | 3 |
| LINC00410 | CRB1 | 0.697611 | 4 | 0 | 4 |
| LINC00410 | MASP2 | 0.691591 | 3 | 0 | 3 |
| LINC00410 | BLVRB | 0.690544 | 3 | 0 | 3 |
| LINC00410 | GYS2 | 0.690057 | 3 | 0 | 3 |
| LINC00410 | SPINK7 | 0.687473 | 3 | 0 | 3 |
| LINC00410 | SAMD5 | 0.683131 | 3 | 0 | 3 |
| LINC00410 | ABCA5 | 0.682291 | 3 | 0 | 3 |
| LINC00410 | CTSE | 0.677792 | 3 | 0 | 3 |
| LINC00410 | LYNX1 | 0.674679 | 3 | 0 | 3 |
| LINC00410 | MIXL1 | 0.66991 | 4 | 0 | 3 |
| LINC00410 | SPHKAP | 0.669574 | 4 | 0 | 3 |
| LINC00410 | ATG9B | 0.667942 | 3 | 0 | 3 |
| LINC00410 | UPK1A | 0.664274 | 3 | 0 | 3 |
For details and further investigation, click here
