| Full name: long intergenic non-protein coding RNA 1122 | Alias Symbol: FLJ30838|AC007092.1 | ||
| Type: non-coding RNA | Cytoband: 2p16.1 | ||
| Entrez ID: 400955 | HGNC ID: HGNC:49267 | Ensembl Gene: ENSG00000233723 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01122:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01122 | 400955 | 1562326_at | -0.0964 | 0.7149 | |
| GSE26886 | LINC01122 | 400955 | 1562326_at | -0.1326 | 0.0950 | |
| GSE45670 | LINC01122 | 400955 | 1562326_at | 0.0778 | 0.4240 | |
| GSE53622 | LINC01122 | 400955 | 12773 | 0.2976 | 0.0247 | |
| GSE53624 | LINC01122 | 400955 | 12773 | 0.1558 | 0.3038 | |
| GSE63941 | LINC01122 | 400955 | 1562326_at | -0.0871 | 0.6349 | |
| GSE77861 | LINC01122 | 400955 | 1557472_a_at | -0.1190 | 0.1482 | |
| SRP133303 | LINC01122 | 400955 | RNAseq | 0.3254 | 0.0461 | |
| SRP193095 | LINC01122 | 400955 | RNAseq | 0.1897 | 0.3097 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01122 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01122:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01122 | 400955 | 7 | 1 | 22 | |
| GSE20123 | LINC01122 | 400955 | 7 | 1 | 22 | |
| GSE43470 | LINC01122 | 400955 | 6 | 0 | 37 | |
| GSE46452 | LINC01122 | 400955 | 2 | 3 | 54 | |
| GSE47630 | LINC01122 | 400955 | 8 | 0 | 32 | |
| GSE54993 | LINC01122 | 400955 | 0 | 7 | 63 | |
| GSE54994 | LINC01122 | 400955 | 12 | 0 | 41 | |
| GSE60625 | LINC01122 | 400955 | 0 | 3 | 8 | |
| GSE74703 | LINC01122 | 400955 | 6 | 0 | 30 | |
| GSE74704 | LINC01122 | 400955 | 7 | 1 | 12 |
Total number of gains: 55; Total number of losses: 16; Total Number of normals: 321.
Somatic mutations of LINC01122:
Generating mutation plots.
Highly correlated genes for LINC01122:
Showing top 20/127 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01122 | F2RL3 | 0.830497 | 3 | 0 | 3 |
| LINC01122 | ZNF667 | 0.813935 | 3 | 0 | 3 |
| LINC01122 | MYL7 | 0.759714 | 3 | 0 | 3 |
| LINC01122 | CACNG7 | 0.726874 | 3 | 0 | 3 |
| LINC01122 | FAM222A-AS1 | 0.726203 | 3 | 0 | 3 |
| LINC01122 | OR11A1 | 0.712976 | 3 | 0 | 3 |
| LINC01122 | SUN5 | 0.705394 | 3 | 0 | 3 |
| LINC01122 | CNTNAP1 | 0.69684 | 3 | 0 | 3 |
| LINC01122 | MDH1B | 0.693253 | 3 | 0 | 3 |
| LINC01122 | C1orf167 | 0.69015 | 3 | 0 | 3 |
| LINC01122 | LINC00884 | 0.689317 | 3 | 0 | 3 |
| LINC01122 | CASC2 | 0.685929 | 4 | 0 | 4 |
| LINC01122 | PCA3 | 0.684708 | 3 | 0 | 3 |
| LINC01122 | ZNF445 | 0.684006 | 3 | 0 | 3 |
| LINC01122 | PNPLA7 | 0.677514 | 3 | 0 | 3 |
| LINC01122 | DEFB121 | 0.676404 | 4 | 0 | 3 |
| LINC01122 | ANKDD1A | 0.668901 | 4 | 0 | 4 |
| LINC01122 | CLDN9 | 0.664666 | 3 | 0 | 3 |
| LINC01122 | RAX2 | 0.65717 | 4 | 0 | 3 |
| LINC01122 | KRT73 | 0.655204 | 4 | 0 | 3 |
For details and further investigation, click here
