ID4

 

Full name: inhibitor of DNA binding 4, HLH protein Alias Symbol: bHLHb27
Type: protein-coding gene Cytoband: 6p22.3
Entrez ID: 3400 HGNC ID: HGNC:5363 Ensembl Gene: ENSG00000172201 OMIM ID: 600581
Drug and gene relationship at DGIdb

 

ID4 involved pathways:

KEGG pathway Description View
hsa04550Signaling pathways regulating pluripotency of stem cells

 

Expression of ID4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ID4 3400 209291_at -1.9771 0.0567
GSE20347 ID4 3400 209291_at -2.3774 0.0000
GSE23400 ID4 3400 209291_at -1.7737 0.0000
GSE26886 ID4 3400 209291_at -2.5705 0.0000
GSE29001 ID4 3400 209291_at -2.9828 0.0000
GSE38129 ID4 3400 209291_at -2.1783 0.0000
GSE45670 ID4 3400 209291_at -2.2009 0.0000
GSE63941 ID4 3400 209291_at -2.5170 0.1927
GSE77861 ID4 3400 209291_at -1.5006 0.0266
GSE97050 ID4 3400 A_33_P3229370 -1.1741 0.0820
SRP007169 ID4 3400 RNAseq -2.8707 0.0000
SRP008496 ID4 3400 RNAseq -2.6114 0.0000
SRP064894 ID4 3400 RNAseq -1.5471 0.0000
SRP133303 ID4 3400 RNAseq -1.5634 0.0006
SRP159526 ID4 3400 RNAseq -0.7323 0.1972
SRP193095 ID4 3400 RNAseq -1.5219 0.0000
SRP219564 ID4 3400 RNAseq -1.2030 0.0273
TCGA ID4 3400 RNAseq -0.5835 0.0001

Upregulated datasets: 0; Downregulated datasets: 13.  


 

Survival by ID4 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of ID4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ID4 3400 3 5 22
GSE20123 ID4 3400 3 5 22
GSE43470 ID4 3400 9 0 34
GSE46452 ID4 3400 2 9 48
GSE47630 ID4 3400 10 4 26
GSE54993 ID4 3400 1 1 68
GSE54994 ID4 3400 11 3 39
GSE60625 ID4 3400 0 1 10
GSE74703 ID4 3400 8 0 28
GSE74704 ID4 3400 1 1 18
TCGA ID4 3400 18 23 55

Total number of gains: 66; Total number of losses: 52; Total Number of normals: 370.  


 

Somatic mutations of ID4:

 

Generating mutation plots.

 

Highly correlated genes for ID4:

 

Showing top 20/1555 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ID4MYOCD0.854019303
ID4XKR40.830405303
ID4MTMR100.827552505
ID4ZMAT10.827263303
ID4RNF1500.82075303
ID4CTTNBP20.810049404
ID4ZNF8440.808349505
ID4BOC0.807101404
ID4ZNF6620.805695505
ID4KLHL150.79586303
ID4HPGD0.794578909
ID4EIF4E30.793518505
ID4SH3BGRL20.790821505
ID4SORBS20.789045909
ID4RBPMS0.78851910010
ID4PTGIS0.786983404
ID4SMOC20.786541303
ID4CYP4V20.781412303
ID4HLF0.775173909
ID4FBXO100.772654303

For details and further investigation, click here