| Full name: JMJD1C antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q21.3 | ||
| Entrez ID: 84989 | HGNC ID: HGNC:28222 | Ensembl Gene: ENSG00000272767 | OMIM ID: |
Expression of JMJD1C-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | JMJD1C-AS1 | 84989 | 1552665_at | 0.2472 | 0.6702 | |
| GSE26886 | JMJD1C-AS1 | 84989 | 1552665_at | 0.4066 | 0.0982 | |
| GSE45670 | JMJD1C-AS1 | 84989 | 1552665_at | 0.1295 | 0.5359 | |
| GSE53622 | JMJD1C-AS1 | 84989 | 17692 | 0.4232 | 0.0054 | |
| GSE53624 | JMJD1C-AS1 | 84989 | 17692 | 0.6621 | 0.0000 | |
| GSE63941 | JMJD1C-AS1 | 84989 | 1552665_at | 0.8545 | 0.3609 | |
| GSE77861 | JMJD1C-AS1 | 84989 | 1552665_at | -0.1323 | 0.3150 | |
| SRP133303 | JMJD1C-AS1 | 84989 | RNAseq | 0.2403 | 0.3398 | |
| SRP193095 | JMJD1C-AS1 | 84989 | RNAseq | 0.3193 | 0.0695 | |
| SRP219564 | JMJD1C-AS1 | 84989 | RNAseq | 0.8286 | 0.0781 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by JMJD1C-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of JMJD1C-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | JMJD1C-AS1 | 84989 | 3 | 7 | 20 | |
| GSE20123 | JMJD1C-AS1 | 84989 | 3 | 7 | 20 | |
| GSE43470 | JMJD1C-AS1 | 84989 | 3 | 5 | 35 | |
| GSE46452 | JMJD1C-AS1 | 84989 | 0 | 11 | 48 | |
| GSE47630 | JMJD1C-AS1 | 84989 | 3 | 13 | 24 | |
| GSE54993 | JMJD1C-AS1 | 84989 | 9 | 0 | 61 | |
| GSE54994 | JMJD1C-AS1 | 84989 | 4 | 10 | 39 | |
| GSE60625 | JMJD1C-AS1 | 84989 | 0 | 0 | 11 | |
| GSE74703 | JMJD1C-AS1 | 84989 | 3 | 3 | 30 | |
| GSE74704 | JMJD1C-AS1 | 84989 | 2 | 5 | 13 |
Total number of gains: 30; Total number of losses: 61; Total Number of normals: 301.
Somatic mutations of JMJD1C-AS1:
Generating mutation plots.
Highly correlated genes for JMJD1C-AS1:
Showing all 20 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| JMJD1C-AS1 | SOHLH1 | 0.672941 | 3 | 0 | 3 |
| JMJD1C-AS1 | FGF11 | 0.639324 | 3 | 0 | 3 |
| JMJD1C-AS1 | CCDC40 | 0.596375 | 4 | 0 | 3 |
| JMJD1C-AS1 | SLC2A4RG | 0.588603 | 5 | 0 | 4 |
| JMJD1C-AS1 | LINC01119 | 0.576073 | 3 | 0 | 3 |
| JMJD1C-AS1 | DNAAF3 | 0.571198 | 4 | 0 | 3 |
| JMJD1C-AS1 | FADS3 | 0.568302 | 4 | 0 | 3 |
| JMJD1C-AS1 | GLIPR1L1 | 0.568121 | 3 | 0 | 3 |
| JMJD1C-AS1 | APCDD1L | 0.566366 | 4 | 0 | 3 |
| JMJD1C-AS1 | AZIN2 | 0.565454 | 4 | 0 | 3 |
| JMJD1C-AS1 | FGFR4 | 0.562731 | 3 | 0 | 3 |
| JMJD1C-AS1 | PIGK | 0.550891 | 3 | 0 | 3 |
| JMJD1C-AS1 | IRF7 | 0.544573 | 4 | 0 | 3 |
| JMJD1C-AS1 | ATOX1 | 0.541476 | 4 | 0 | 3 |
| JMJD1C-AS1 | IQCG | 0.538837 | 4 | 0 | 3 |
| JMJD1C-AS1 | CEBPB | 0.535644 | 4 | 0 | 3 |
| JMJD1C-AS1 | CLRN1-AS1 | 0.531824 | 3 | 0 | 3 |
| JMJD1C-AS1 | SLC43A2 | 0.526398 | 5 | 0 | 4 |
| JMJD1C-AS1 | GNA12 | 0.522219 | 3 | 0 | 3 |
| JMJD1C-AS1 | BCORL1 | 0.515864 | 4 | 0 | 3 |
For details and further investigation, click here
