LEF1

 

Full name: lymphoid enhancer binding factor 1 Alias Symbol: TCF1ALPHA|TCF10|TCF7L3
Type: protein-coding gene Cytoband: 4q25
Entrez ID: 51176 HGNC ID: HGNC:6551 Ensembl Gene: ENSG00000138795 OMIM ID: 153245
Drug and gene relationship at DGIdb

 

LEF1 involved pathways:

KEGG pathway Description View
hsa04310Wnt signaling pathway
hsa04390Hippo signaling pathway
hsa04520Adherens junction
hsa04916Melanogenesis
hsa05200Pathways in cancer
hsa05210Colorectal cancer
hsa05213Endometrial cancer
hsa05215Prostate cancer
hsa05216Thyroid cancer
hsa05217Basal cell carcinoma
hsa05221Acute myeloid leukemia

 

Expression of LEF1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LEF1 51176 221558_s_at 0.2373 0.7018
GSE20347 LEF1 51176 221558_s_at 0.6272 0.0414
GSE23400 LEF1 51176 221558_s_at 0.6535 0.0000
GSE26886 LEF1 51176 221558_s_at 0.8039 0.1188
GSE29001 LEF1 51176 221558_s_at 0.0144 0.9829
GSE38129 LEF1 51176 221558_s_at 1.0181 0.0004
GSE45670 LEF1 51176 221558_s_at 0.3822 0.1438
GSE53622 LEF1 51176 23039 0.9370 0.0000
GSE53624 LEF1 51176 21090 0.5997 0.0000
GSE63941 LEF1 51176 221558_s_at -0.6444 0.6602
GSE77861 LEF1 51176 221558_s_at 0.9111 0.0392
GSE97050 LEF1 51176 A_24_P20630 0.7827 0.1090
SRP007169 LEF1 51176 RNAseq 0.4939 0.3773
SRP008496 LEF1 51176 RNAseq 1.0991 0.0063
SRP064894 LEF1 51176 RNAseq 0.7680 0.0014
SRP133303 LEF1 51176 RNAseq 0.6537 0.0344
SRP159526 LEF1 51176 RNAseq 1.3992 0.0018
SRP193095 LEF1 51176 RNAseq 0.3870 0.1276
SRP219564 LEF1 51176 RNAseq 0.7542 0.2254
TCGA LEF1 51176 RNAseq 0.6776 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by LEF1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of LEF1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LEF1 51176 0 12 18
GSE20123 LEF1 51176 0 12 18
GSE43470 LEF1 51176 0 13 30
GSE46452 LEF1 51176 1 36 22
GSE47630 LEF1 51176 0 20 20
GSE54993 LEF1 51176 9 0 61
GSE54994 LEF1 51176 1 10 42
GSE60625 LEF1 51176 0 3 8
GSE74703 LEF1 51176 0 11 25
GSE74704 LEF1 51176 0 6 14
TCGA LEF1 51176 8 35 53

Total number of gains: 19; Total number of losses: 158; Total Number of normals: 311.  


 

Somatic mutations of LEF1:

 

Generating mutation plots.

 

Highly correlated genes for LEF1:

 

Showing top 20/570 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LEF1POU5F20.765156303
LEF1ARHGAP280.734991303
LEF1SSH10.731416303
LEF1TOR1A0.722312303
LEF1DHRSX0.713283303
LEF1KCNE30.704459505
LEF1OAF0.701353303
LEF1OSTC0.685353303
LEF1CELSR20.675409303
LEF1ARHGAP90.671539303
LEF1SLC30A70.670423403
LEF1CHST30.66608303
LEF1VMA210.6606403
LEF1ESCO20.657021403
LEF1POGZ0.652873404
LEF1KRTCAP30.652708404
LEF1ZNRF30.651494403
LEF1CDCA70.648463403
LEF1TMTC40.643055503
LEF1KIAA01000.640979303

For details and further investigation, click here