| Full name: long intergenic non-protein coding RNA 671 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 17q21.31 | ||
| Entrez ID: 388387 | HGNC ID: HGNC:44339 | Ensembl Gene: ENSG00000213373 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00671:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00671 | 388387 | 1556737_at | -0.0347 | 0.8807 | |
| GSE26886 | LINC00671 | 388387 | 1556737_at | -0.0043 | 0.9722 | |
| GSE45670 | LINC00671 | 388387 | 1556737_at | 0.1010 | 0.3206 | |
| GSE53622 | LINC00671 | 388387 | 5025 | 0.1917 | 0.0114 | |
| GSE53624 | LINC00671 | 388387 | 5025 | 0.2471 | 0.0067 | |
| GSE63941 | LINC00671 | 388387 | 1556737_at | 0.1436 | 0.3445 | |
| GSE77861 | LINC00671 | 388387 | 1556737_at | -0.1471 | 0.1857 | |
| SRP133303 | LINC00671 | 388387 | RNAseq | 0.6090 | 0.0013 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00671 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00671:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00671 | 388387 | 6 | 2 | 22 | |
| GSE20123 | LINC00671 | 388387 | 6 | 2 | 22 | |
| GSE43470 | LINC00671 | 388387 | 1 | 2 | 40 | |
| GSE46452 | LINC00671 | 388387 | 34 | 0 | 25 | |
| GSE47630 | LINC00671 | 388387 | 8 | 1 | 31 | |
| GSE54993 | LINC00671 | 388387 | 3 | 4 | 63 | |
| GSE54994 | LINC00671 | 388387 | 8 | 5 | 40 | |
| GSE60625 | LINC00671 | 388387 | 4 | 0 | 7 | |
| GSE74703 | LINC00671 | 388387 | 1 | 1 | 34 | |
| GSE74704 | LINC00671 | 388387 | 4 | 1 | 15 | |
| TCGA | LINC00671 | 388387 | 22 | 7 | 67 |
Total number of gains: 97; Total number of losses: 25; Total Number of normals: 366.
Somatic mutations of LINC00671:
Generating mutation plots.
Highly correlated genes for LINC00671:
Showing top 20/252 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00671 | CIB3 | 0.793481 | 3 | 0 | 3 |
| LINC00671 | CECR9 | 0.723813 | 3 | 0 | 3 |
| LINC00671 | SIM1 | 0.720574 | 3 | 0 | 3 |
| LINC00671 | KCNF1 | 0.713035 | 3 | 0 | 3 |
| LINC00671 | SORCS3 | 0.709202 | 3 | 0 | 3 |
| LINC00671 | MRPL57 | 0.702099 | 3 | 0 | 3 |
| LINC00671 | CD72 | 0.69323 | 3 | 0 | 3 |
| LINC00671 | ZNF843 | 0.690218 | 3 | 0 | 3 |
| LINC00671 | SIGLEC11 | 0.678327 | 3 | 0 | 3 |
| LINC00671 | RBAKDN | 0.66984 | 4 | 0 | 4 |
| LINC00671 | ZNF32-AS3 | 0.665455 | 4 | 0 | 4 |
| LINC00671 | RASL10B | 0.662822 | 4 | 0 | 3 |
| LINC00671 | CDH22 | 0.660286 | 4 | 0 | 4 |
| LINC00671 | PRKCG | 0.657752 | 4 | 0 | 3 |
| LINC00671 | KRTAP3-1 | 0.656007 | 3 | 0 | 3 |
| LINC00671 | F2RL3 | 0.654209 | 4 | 0 | 3 |
| LINC00671 | RAPGEF3 | 0.65273 | 3 | 0 | 3 |
| LINC00671 | AK1 | 0.648077 | 3 | 0 | 3 |
| LINC00671 | ZDHHC19 | 0.648008 | 3 | 0 | 3 |
| LINC00671 | LINC01122 | 0.648003 | 3 | 0 | 3 |
For details and further investigation, click here
