| Full name: long intergenic non-protein coding RNA 857 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q22.3 | ||
| Entrez ID: 439990 | HGNC ID: HGNC:45114 | Ensembl Gene: ENSG00000237523 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00857:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00857 | 439990 | 1569322_at | -0.0969 | 0.7496 | |
| GSE26886 | LINC00857 | 439990 | 1569322_at | -0.2457 | 0.0235 | |
| GSE45670 | LINC00857 | 439990 | 1569322_at | -0.0864 | 0.5186 | |
| GSE53622 | LINC00857 | 439990 | 99498 | 0.3622 | 0.0029 | |
| GSE53624 | LINC00857 | 439990 | 99498 | 0.2031 | 0.0281 | |
| GSE63941 | LINC00857 | 439990 | 1569322_at | 0.8298 | 0.3155 | |
| GSE77861 | LINC00857 | 439990 | 1569322_at | -0.0379 | 0.6955 | |
| SRP064894 | LINC00857 | 439990 | RNAseq | -0.7485 | 0.0053 | |
| SRP133303 | LINC00857 | 439990 | RNAseq | 0.0275 | 0.8746 | |
| SRP159526 | LINC00857 | 439990 | RNAseq | -1.6046 | 0.0000 | |
| SRP193095 | LINC00857 | 439990 | RNAseq | -0.0496 | 0.8008 | |
| SRP219564 | LINC00857 | 439990 | RNAseq | -0.9328 | 0.0319 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LINC00857 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00857:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00857 | 439990 | 2 | 4 | 24 | |
| GSE20123 | LINC00857 | 439990 | 2 | 3 | 25 | |
| GSE43470 | LINC00857 | 439990 | 1 | 7 | 35 | |
| GSE46452 | LINC00857 | 439990 | 0 | 11 | 48 | |
| GSE47630 | LINC00857 | 439990 | 2 | 14 | 24 | |
| GSE54993 | LINC00857 | 439990 | 7 | 0 | 63 | |
| GSE54994 | LINC00857 | 439990 | 1 | 12 | 40 | |
| GSE60625 | LINC00857 | 439990 | 0 | 0 | 11 | |
| GSE74703 | LINC00857 | 439990 | 1 | 4 | 31 | |
| GSE74704 | LINC00857 | 439990 | 1 | 1 | 18 | |
| TCGA | LINC00857 | 439990 | 10 | 24 | 62 |
Total number of gains: 27; Total number of losses: 80; Total Number of normals: 381.
Somatic mutations of LINC00857:
Generating mutation plots.
Highly correlated genes for LINC00857:
Showing top 20/65 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00857 | LINC00862 | 0.742878 | 3 | 0 | 3 |
| LINC00857 | LINC00858 | 0.694101 | 3 | 0 | 3 |
| LINC00857 | SPAM1 | 0.665692 | 3 | 0 | 3 |
| LINC00857 | RAX2 | 0.665345 | 3 | 0 | 3 |
| LINC00857 | OPRL1 | 0.660843 | 3 | 0 | 3 |
| LINC00857 | ANKDD1A | 0.657982 | 3 | 0 | 3 |
| LINC00857 | PRR30 | 0.648338 | 3 | 0 | 3 |
| LINC00857 | LPP-AS2 | 0.642986 | 3 | 0 | 3 |
| LINC00857 | PWRN2 | 0.640944 | 3 | 0 | 3 |
| LINC00857 | LINC00924 | 0.640227 | 3 | 0 | 3 |
| LINC00857 | LYZL1 | 0.640209 | 3 | 0 | 3 |
| LINC00857 | BARHL1 | 0.638343 | 3 | 0 | 3 |
| LINC00857 | TEX26-AS1 | 0.637368 | 3 | 0 | 3 |
| LINC00857 | GLI4 | 0.636609 | 3 | 0 | 3 |
| LINC00857 | DLGAP1-AS3 | 0.625909 | 4 | 0 | 3 |
| LINC00857 | ZBTB46-AS1 | 0.623855 | 3 | 0 | 3 |
| LINC00857 | LINC01122 | 0.622583 | 4 | 0 | 3 |
| LINC00857 | NRSN1 | 0.618043 | 3 | 0 | 3 |
| LINC00857 | NPPB | 0.61009 | 3 | 0 | 3 |
| LINC00857 | SLC6A2 | 0.607789 | 3 | 0 | 3 |
For details and further investigation, click here
