GLI4

 

Full name: GLI family zinc finger 4 Alias Symbol: HKR4|ZNF928
Type: protein-coding gene Cytoband: 8q24.3
Entrez ID: 2738 HGNC ID: HGNC:4320 Ensembl Gene: ENSG00000250571 OMIM ID: 165280
Drug and gene relationship at DGIdb

 

Expression of GLI4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GLI4 2738 243076_x_at -0.1738 0.3264
GSE26886 GLI4 2738 243076_x_at -0.2807 0.0109
GSE45670 GLI4 2738 243076_x_at 0.0857 0.3644
GSE53622 GLI4 2738 59560 0.2219 0.0016
GSE53624 GLI4 2738 59560 0.1594 0.0762
GSE63941 GLI4 2738 243076_x_at 0.1432 0.3120
GSE77861 GLI4 2738 243076_x_at -0.1714 0.1266
GSE97050 GLI4 2738 A_33_P3285715 0.1639 0.3950
SRP007169 GLI4 2738 RNAseq -0.1173 0.8505
SRP064894 GLI4 2738 RNAseq 0.6814 0.0236
SRP133303 GLI4 2738 RNAseq -0.2030 0.1136
SRP159526 GLI4 2738 RNAseq 0.2523 0.4050
SRP193095 GLI4 2738 RNAseq 0.4882 0.0006
SRP219564 GLI4 2738 RNAseq 0.5735 0.3691
TCGA GLI4 2738 RNAseq 0.1745 0.0790

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by GLI4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GLI4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GLI4 2738 17 1 12
GSE20123 GLI4 2738 17 1 12
GSE43470 GLI4 2738 17 2 24
GSE46452 GLI4 2738 27 0 32
GSE47630 GLI4 2738 23 1 16
GSE54993 GLI4 2738 0 25 45
GSE54994 GLI4 2738 39 1 13
GSE60625 GLI4 2738 3 4 4
GSE74703 GLI4 2738 15 1 20
GSE74704 GLI4 2738 10 0 10
TCGA GLI4 2738 64 2 30

Total number of gains: 232; Total number of losses: 38; Total Number of normals: 218.  


 

Somatic mutations of GLI4:

 

Generating mutation plots.

 

Highly correlated genes for GLI4:

 

Showing top 20/292 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GLI4TNNI20.789805303
GLI4CSH10.786245303
GLI4LCE1D0.769129303
GLI4RAX20.76373303
GLI4PDZD70.753848303
GLI4FLT40.741893303
GLI4GPR250.734535303
GLI4SPACA30.734414403
GLI4CHD50.732393303
GLI4CCDC1540.721115404
GLI4LTK0.720359303
GLI4TSPO0.718572303
GLI4PIK3C2B0.710759303
GLI4BFSP2-AS10.710025404
GLI4CATSPERG0.708849403
GLI4CLDN90.707293403
GLI4SNORA680.706511303
GLI4RXFP30.706114505
GLI4SLC6A30.70432303
GLI4CAMKV0.702176404

For details and further investigation, click here