| Full name: long intergenic non-protein coding RNA 862 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 1q32.1 | ||
| Entrez ID: 554279 | HGNC ID: HGNC:21901 | Ensembl Gene: ENSG00000203721 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00862:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00862 | 554279 | 1562909_at | 0.0940 | 0.7178 | |
| GSE26886 | LINC00862 | 554279 | 1562909_at | -0.0406 | 0.6636 | |
| GSE45670 | LINC00862 | 554279 | 1562909_at | 0.0457 | 0.6046 | |
| GSE53622 | LINC00862 | 554279 | 118544 | 0.2890 | 0.0472 | |
| GSE53624 | LINC00862 | 554279 | 118544 | 0.2238 | 0.0733 | |
| GSE63941 | LINC00862 | 554279 | 1562909_at | -0.1130 | 0.4381 | |
| GSE77861 | LINC00862 | 554279 | 1562909_at | -0.1574 | 0.0405 | |
| SRP133303 | LINC00862 | 554279 | RNAseq | 0.8128 | 0.0022 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00862 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00862:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00862 | 554279 | 10 | 0 | 20 | |
| GSE20123 | LINC00862 | 554279 | 10 | 0 | 20 | |
| GSE43470 | LINC00862 | 554279 | 6 | 0 | 37 | |
| GSE46452 | LINC00862 | 554279 | 3 | 1 | 55 | |
| GSE47630 | LINC00862 | 554279 | 14 | 0 | 26 | |
| GSE54993 | LINC00862 | 554279 | 0 | 6 | 64 | |
| GSE54994 | LINC00862 | 554279 | 15 | 1 | 37 | |
| GSE60625 | LINC00862 | 554279 | 0 | 0 | 11 | |
| GSE74703 | LINC00862 | 554279 | 6 | 0 | 30 | |
| GSE74704 | LINC00862 | 554279 | 4 | 0 | 16 | |
| TCGA | LINC00862 | 554279 | 42 | 4 | 50 |
Total number of gains: 110; Total number of losses: 12; Total Number of normals: 366.
Somatic mutations of LINC00862:
Generating mutation plots.
Highly correlated genes for LINC00862:
Showing top 20/96 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00862 | F2RL3 | 0.779977 | 3 | 0 | 3 |
| LINC00862 | GHSR | 0.772616 | 3 | 0 | 3 |
| LINC00862 | GRIA4 | 0.754519 | 3 | 0 | 3 |
| LINC00862 | LIPE-AS1 | 0.749942 | 3 | 0 | 3 |
| LINC00862 | KLF17 | 0.748723 | 3 | 0 | 3 |
| LINC00862 | LINC00857 | 0.742878 | 3 | 0 | 3 |
| LINC00862 | FAM222A-AS1 | 0.708689 | 3 | 0 | 3 |
| LINC00862 | TMEM105 | 0.708118 | 3 | 0 | 3 |
| LINC00862 | VHL | 0.700125 | 3 | 0 | 3 |
| LINC00862 | HCG9 | 0.684191 | 3 | 0 | 3 |
| LINC00862 | C2orf72 | 0.681391 | 3 | 0 | 3 |
| LINC00862 | LINC00112 | 0.679601 | 3 | 0 | 3 |
| LINC00862 | ZBTB46-AS1 | 0.678974 | 3 | 0 | 3 |
| LINC00862 | SLC18A3 | 0.677994 | 3 | 0 | 3 |
| LINC00862 | N6AMT1 | 0.677927 | 3 | 0 | 3 |
| LINC00862 | ELOVL3 | 0.675825 | 3 | 0 | 3 |
| LINC00862 | ZNF445 | 0.67483 | 4 | 0 | 3 |
| LINC00862 | TMCC1-AS1 | 0.672256 | 4 | 0 | 3 |
| LINC00862 | INPP5J | 0.670385 | 3 | 0 | 3 |
| LINC00862 | INSC | 0.670311 | 3 | 0 | 3 |
For details and further investigation, click here
