| Full name: long intergenic non-protein coding RNA 1226 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 1p35.2 | ||
| Entrez ID: 284551 | HGNC ID: HGNC:49678 | Ensembl Gene: ENSG00000284543 | OMIM ID: |
Expression of LINC01226:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01226 | 284551 | 1563802_at | -0.0416 | 0.9041 | |
| GSE26886 | LINC01226 | 284551 | 1563802_at | -0.2114 | 0.0839 | |
| GSE45670 | LINC01226 | 284551 | 1563802_at | 0.0819 | 0.3856 | |
| GSE63941 | LINC01226 | 284551 | 1563802_at | -0.2198 | 0.2320 | |
| GSE77861 | LINC01226 | 284551 | 1563802_at | -0.1500 | 0.2170 | |
| SRP064894 | LINC01226 | 284551 | RNAseq | -0.4584 | 0.1206 | |
| SRP133303 | LINC01226 | 284551 | RNAseq | 0.0648 | 0.6188 | |
| SRP159526 | LINC01226 | 284551 | RNAseq | -0.1418 | 0.7629 | |
| SRP193095 | LINC01226 | 284551 | RNAseq | 0.2287 | 0.0644 | |
| SRP219564 | LINC01226 | 284551 | RNAseq | -0.0017 | 0.9958 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of LINC01226:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01226 | 284551 | 1 | 5 | 24 | |
| GSE20123 | LINC01226 | 284551 | 1 | 4 | 25 | |
| GSE43470 | LINC01226 | 284551 | 4 | 6 | 33 | |
| GSE46452 | LINC01226 | 284551 | 5 | 1 | 53 | |
| GSE47630 | LINC01226 | 284551 | 8 | 3 | 29 | |
| GSE54993 | LINC01226 | 284551 | 1 | 1 | 68 | |
| GSE54994 | LINC01226 | 284551 | 11 | 2 | 40 | |
| GSE60625 | LINC01226 | 284551 | 0 | 0 | 11 | |
| GSE74703 | LINC01226 | 284551 | 3 | 4 | 29 | |
| GSE74704 | LINC01226 | 284551 | 0 | 0 | 20 |
Total number of gains: 34; Total number of losses: 26; Total Number of normals: 332.
Somatic mutations of LINC01226:
Generating mutation plots.
Highly correlated genes for LINC01226:
Showing top 20/48 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01226 | SLC17A9 | 0.691169 | 3 | 0 | 3 |
| LINC01226 | MRGPRG-AS1 | 0.684311 | 4 | 0 | 4 |
| LINC01226 | LINC00906 | 0.682645 | 4 | 0 | 3 |
| LINC01226 | GALNT9 | 0.673069 | 3 | 0 | 3 |
| LINC01226 | TBX4 | 0.656983 | 3 | 0 | 3 |
| LINC01226 | ANO2 | 0.649139 | 4 | 0 | 3 |
| LINC01226 | GNRHR | 0.63324 | 3 | 0 | 3 |
| LINC01226 | MYO1A | 0.632904 | 4 | 0 | 3 |
| LINC01226 | TMEM222 | 0.617796 | 3 | 0 | 3 |
| LINC01226 | NKX2-1 | 0.616854 | 4 | 0 | 4 |
| LINC01226 | ADIG | 0.614806 | 4 | 0 | 3 |
| LINC01226 | CACNG7 | 0.612033 | 3 | 0 | 3 |
| LINC01226 | PRRX2-AS1 | 0.607547 | 4 | 0 | 3 |
| LINC01226 | PRR29 | 0.605401 | 4 | 0 | 3 |
| LINC01226 | FTCD | 0.605013 | 3 | 0 | 3 |
| LINC01226 | GPR26 | 0.603781 | 3 | 0 | 3 |
| LINC01226 | GPR37L1 | 0.603031 | 3 | 0 | 3 |
| LINC01226 | XKR7 | 0.59717 | 3 | 0 | 3 |
| LINC01226 | CLDN2 | 0.596631 | 3 | 0 | 3 |
| LINC01226 | CLEC1B | 0.595336 | 4 | 0 | 3 |
For details and further investigation, click here
