| Full name: long intergenic non-protein coding RNA 965 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 8p23.1 | ||
| Entrez ID: 349196 | HGNC ID: HGNC:28022 | Ensembl Gene: | OMIM ID: |
Expression of LINC00965:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00965 | 349196 | 222184_at | 0.4779 | 0.2666 | |
| GSE20347 | LINC00965 | 349196 | 222184_at | 0.3804 | 0.0053 | |
| GSE23400 | LINC00965 | 349196 | 222184_at | 0.1042 | 0.0217 | |
| GSE26886 | LINC00965 | 349196 | 222184_at | 0.1447 | 0.5047 | |
| GSE29001 | LINC00965 | 349196 | 222184_at | 0.3476 | 0.2667 | |
| GSE38129 | LINC00965 | 349196 | 222184_at | 0.2608 | 0.0878 | |
| GSE45670 | LINC00965 | 349196 | 222184_at | -0.0982 | 0.5899 | |
| GSE63941 | LINC00965 | 349196 | 222184_at | -1.6183 | 0.0002 | |
| GSE77861 | LINC00965 | 349196 | 222184_at | -0.0743 | 0.6227 | |
| SRP064894 | LINC00965 | 349196 | RNAseq | -0.4722 | 0.0876 | |
| SRP133303 | LINC00965 | 349196 | RNAseq | -0.5565 | 0.1286 | |
| SRP159526 | LINC00965 | 349196 | RNAseq | 0.6259 | 0.2852 | |
| SRP193095 | LINC00965 | 349196 | RNAseq | 0.3267 | 0.1599 | |
| SRP219564 | LINC00965 | 349196 | RNAseq | -0.0404 | 0.9486 |
Upregulated datasets: 0; Downregulated datasets: 1.
Copy number change of LINC00965:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00965 | 349196 | 4 | 10 | 16 | |
| GSE20123 | LINC00965 | 349196 | 4 | 10 | 16 | |
| GSE43470 | LINC00965 | 349196 | 4 | 10 | 29 | |
| GSE46452 | LINC00965 | 349196 | 12 | 14 | 33 | |
| GSE47630 | LINC00965 | 349196 | 8 | 10 | 22 | |
| GSE54993 | LINC00965 | 349196 | 3 | 14 | 53 | |
| GSE54994 | LINC00965 | 349196 | 10 | 19 | 24 | |
| GSE60625 | LINC00965 | 349196 | 3 | 0 | 8 | |
| GSE74703 | LINC00965 | 349196 | 4 | 8 | 24 | |
| GSE74704 | LINC00965 | 349196 | 3 | 7 | 10 |
Total number of gains: 55; Total number of losses: 102; Total Number of normals: 235.
Somatic mutations of LINC00965:
Generating mutation plots.
Highly correlated genes for LINC00965:
Showing top 20/53 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00965 | OLFM4 | 0.70838 | 3 | 0 | 3 |
| LINC00965 | IL17RB | 0.694393 | 3 | 0 | 3 |
| LINC00965 | USP51 | 0.662201 | 3 | 0 | 3 |
| LINC00965 | IL13RA2 | 0.644556 | 4 | 0 | 4 |
| LINC00965 | CNTNAP4 | 0.637332 | 3 | 0 | 3 |
| LINC00965 | EVC | 0.619619 | 3 | 0 | 3 |
| LINC00965 | LARP6 | 0.60321 | 5 | 0 | 4 |
| LINC00965 | PLCL2 | 0.601682 | 4 | 0 | 3 |
| LINC00965 | DIP2C | 0.600895 | 4 | 0 | 4 |
| LINC00965 | ANKH | 0.6008 | 3 | 0 | 3 |
| LINC00965 | SEMA4F | 0.593508 | 4 | 0 | 3 |
| LINC00965 | LYRM9 | 0.58602 | 4 | 0 | 3 |
| LINC00965 | CORO2B | 0.585039 | 4 | 0 | 3 |
| LINC00965 | TWSG1 | 0.584694 | 3 | 0 | 3 |
| LINC00965 | DLL3 | 0.577497 | 3 | 0 | 3 |
| LINC00965 | EVA1B | 0.576983 | 4 | 0 | 3 |
| LINC00965 | ADAMTS3 | 0.573475 | 6 | 0 | 4 |
| LINC00965 | C1QTNF1 | 0.570595 | 4 | 0 | 3 |
| LINC00965 | TNFRSF11B | 0.569389 | 5 | 0 | 3 |
| LINC00965 | ARSB | 0.569342 | 6 | 0 | 5 |
For details and further investigation, click here
