LINC01136

 

Full name: long intergenic non-protein coding RNA 1136 Alias Symbol: 
Type: non-coding RNA Cytoband: 1q32.1
Entrez ID: 730227 HGNC ID: HGNC:49452 Ensembl Gene: ENSG00000233791 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC01136:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01136 730227 215756_at -0.2160 0.2730
GSE20347 LINC01136 730227 215756_at -0.0338 0.7470
GSE23400 LINC01136 730227 215756_at -0.1767 0.0007
GSE26886 LINC01136 730227 215756_at -0.0991 0.4766
GSE29001 LINC01136 730227 215756_at -0.3278 0.1050
GSE38129 LINC01136 730227 215756_at -0.1055 0.1507
GSE45670 LINC01136 730227 215756_at 0.1243 0.1421
GSE53622 LINC01136 730227 78093 0.3256 0.0000
GSE53624 LINC01136 730227 78093 0.1869 0.0188
GSE63941 LINC01136 730227 215756_at 0.2540 0.1283
GSE77861 LINC01136 730227 215756_at -0.2443 0.0727
SRP133303 LINC01136 730227 RNAseq 0.3986 0.0517
SRP159526 LINC01136 730227 RNAseq 1.3683 0.1056

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC01136 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC01136:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01136 730227 11 0 19
GSE20123 LINC01136 730227 11 0 19
GSE43470 LINC01136 730227 6 0 37
GSE46452 LINC01136 730227 3 1 55
GSE47630 LINC01136 730227 14 0 26
GSE54993 LINC01136 730227 0 6 64
GSE54994 LINC01136 730227 15 0 38
GSE60625 LINC01136 730227 0 0 11
GSE74703 LINC01136 730227 6 0 30
GSE74704 LINC01136 730227 5 0 15

Total number of gains: 71; Total number of losses: 7; Total Number of normals: 314.  

 

Somatic mutations of LINC01136:

 

Generating mutation plots.

 

Highly correlated genes for LINC01136:

 

Showing top 20/1017 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01136LINC009170.744151303
LINC01136STAC30.736457303
LINC01136VWA5B10.727369303
LINC01136PGC0.708519303
LINC01136MUC5AC0.703071505
LINC01136RASL10B0.702338303
LINC01136LIPE-AS10.691475403
LINC01136PRAP10.690988303
LINC01136SLC2A40.688799303
LINC01136OR2H20.688358505
LINC01136DSCAM-AS10.688356303
LINC01136PSG90.687207403
LINC01136OR2J30.684517403
LINC01136IFNA40.681946404
LINC01136PNPLA70.677862303
LINC01136DEFB1210.677038505
LINC01136TCTN20.676098505
LINC01136AQP40.673014404
LINC01136LCN60.672492404
LINC01136HHLA10.672189504

For details and further investigation, click here