| Full name: LIPE antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 19q13.2 | ||
| Entrez ID: 100996307 | HGNC ID: HGNC:48589 | Ensembl Gene: ENSG00000213904 | OMIM ID: |
Expression of LIPE-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LIPE-AS1 | 100996307 | 243703_x_at | -0.0920 | 0.6311 | |
| GSE26886 | LIPE-AS1 | 100996307 | 243703_x_at | -0.0226 | 0.8411 | |
| GSE45670 | LIPE-AS1 | 100996307 | 243703_x_at | 0.1760 | 0.1564 | |
| GSE53622 | LIPE-AS1 | 100996307 | 81105 | 0.6800 | 0.0000 | |
| GSE53624 | LIPE-AS1 | 100996307 | 81105 | 0.4750 | 0.0000 | |
| GSE63941 | LIPE-AS1 | 100996307 | 243703_x_at | 0.0315 | 0.8734 | |
| GSE77861 | LIPE-AS1 | 100996307 | 243703_x_at | -0.1481 | 0.0718 | |
| SRP133303 | LIPE-AS1 | 100996307 | RNAseq | -0.4558 | 0.3680 | |
| SRP219564 | LIPE-AS1 | 100996307 | RNAseq | -1.6543 | 0.0042 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LIPE-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LIPE-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LIPE-AS1 | 100996307 | 6 | 5 | 19 | |
| GSE20123 | LIPE-AS1 | 100996307 | 4 | 4 | 22 | |
| GSE43470 | LIPE-AS1 | 100996307 | 5 | 11 | 27 | |
| GSE46452 | LIPE-AS1 | 100996307 | 47 | 1 | 11 | |
| GSE47630 | LIPE-AS1 | 100996307 | 8 | 6 | 26 | |
| GSE54993 | LIPE-AS1 | 100996307 | 17 | 4 | 49 | |
| GSE54994 | LIPE-AS1 | 100996307 | 7 | 12 | 34 | |
| GSE60625 | LIPE-AS1 | 100996307 | 9 | 0 | 2 | |
| GSE74703 | LIPE-AS1 | 100996307 | 5 | 7 | 24 | |
| GSE74704 | LIPE-AS1 | 100996307 | 4 | 2 | 14 |
Total number of gains: 112; Total number of losses: 52; Total Number of normals: 228.
Somatic mutations of LIPE-AS1:
Generating mutation plots.
Highly correlated genes for LIPE-AS1:
Showing top 20/179 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LIPE-AS1 | PKLR | 0.840569 | 3 | 0 | 3 |
| LIPE-AS1 | GPR182 | 0.822652 | 3 | 0 | 3 |
| LIPE-AS1 | LINC01366 | 0.767988 | 3 | 0 | 3 |
| LIPE-AS1 | LINC00862 | 0.749942 | 3 | 0 | 3 |
| LIPE-AS1 | SIRPB1 | 0.735587 | 3 | 0 | 3 |
| LIPE-AS1 | FAM205A | 0.734533 | 3 | 0 | 3 |
| LIPE-AS1 | DNAH9 | 0.71705 | 3 | 0 | 3 |
| LIPE-AS1 | F2RL3 | 0.71702 | 3 | 0 | 3 |
| LIPE-AS1 | ZDHHC19 | 0.714405 | 3 | 0 | 3 |
| LIPE-AS1 | RNF180 | 0.705121 | 3 | 0 | 3 |
| LIPE-AS1 | LINC01136 | 0.691475 | 4 | 0 | 3 |
| LIPE-AS1 | LINC00656 | 0.690843 | 3 | 0 | 3 |
| LIPE-AS1 | GNG8 | 0.688299 | 3 | 0 | 3 |
| LIPE-AS1 | BFSP2-AS1 | 0.687315 | 4 | 0 | 3 |
| LIPE-AS1 | KRT35 | 0.686184 | 3 | 0 | 3 |
| LIPE-AS1 | CAMKV | 0.686113 | 3 | 0 | 3 |
| LIPE-AS1 | CECR9 | 0.681859 | 4 | 0 | 4 |
| LIPE-AS1 | BRF1 | 0.680408 | 3 | 0 | 3 |
| LIPE-AS1 | CASC2 | 0.679918 | 3 | 0 | 3 |
| LIPE-AS1 | RHBDD3 | 0.676342 | 3 | 0 | 3 |
For details and further investigation, click here
