| Full name: leucine rich repeat containing 30 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 18p11.23 | ||
| Entrez ID: 339291 | HGNC ID: HGNC:30219 | Ensembl Gene: ENSG00000206422 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LRRC30:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | LRRC30 | 339291 | 21886 | 0.1117 | 0.2240 | |
| GSE53624 | LRRC30 | 339291 | 21886 | -0.1241 | 0.1352 | |
| GSE97050 | LRRC30 | 339291 | A_33_P3379251 | -0.0066 | 0.9790 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LRRC30 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LRRC30:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LRRC30 | 339291 | 7 | 3 | 20 | |
| GSE20123 | LRRC30 | 339291 | 7 | 3 | 20 | |
| GSE43470 | LRRC30 | 339291 | 4 | 5 | 34 | |
| GSE46452 | LRRC30 | 339291 | 3 | 21 | 35 | |
| GSE47630 | LRRC30 | 339291 | 7 | 17 | 16 | |
| GSE54993 | LRRC30 | 339291 | 6 | 3 | 61 | |
| GSE54994 | LRRC30 | 339291 | 9 | 8 | 36 | |
| GSE60625 | LRRC30 | 339291 | 0 | 4 | 7 | |
| GSE74703 | LRRC30 | 339291 | 3 | 3 | 30 | |
| GSE74704 | LRRC30 | 339291 | 5 | 2 | 13 | |
| TCGA | LRRC30 | 339291 | 33 | 20 | 43 |
Total number of gains: 84; Total number of losses: 89; Total Number of normals: 315.
Somatic mutations of LRRC30:
Generating mutation plots.
Highly correlated genes for LRRC30:
Showing top 20/132 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LRRC30 | SLC22A11 | 0.751798 | 3 | 0 | 3 |
| LRRC30 | FOXE3 | 0.742015 | 3 | 0 | 3 |
| LRRC30 | STRC | 0.740595 | 3 | 0 | 3 |
| LRRC30 | ST8SIA3 | 0.737211 | 3 | 0 | 3 |
| LRRC30 | GRIK4 | 0.728211 | 3 | 0 | 3 |
| LRRC30 | SLC26A1 | 0.725691 | 3 | 0 | 3 |
| LRRC30 | SLC18A3 | 0.723578 | 3 | 0 | 3 |
| LRRC30 | GFRA4 | 0.722498 | 3 | 0 | 3 |
| LRRC30 | CRYGC | 0.718538 | 3 | 0 | 3 |
| LRRC30 | MRGPRE | 0.717667 | 3 | 0 | 3 |
| LRRC30 | KCNQ4 | 0.716123 | 3 | 0 | 3 |
| LRRC30 | SLC22A25 | 0.715086 | 3 | 0 | 3 |
| LRRC30 | SERPINA10 | 0.713502 | 3 | 0 | 3 |
| LRRC30 | CIB3 | 0.713341 | 3 | 0 | 3 |
| LRRC30 | KRTAP4-8 | 0.712794 | 3 | 0 | 3 |
| LRRC30 | FBRSL1 | 0.712587 | 3 | 0 | 3 |
| LRRC30 | YY2 | 0.711617 | 3 | 0 | 3 |
| LRRC30 | PLA2G2C | 0.710392 | 3 | 0 | 3 |
| LRRC30 | SLC22A31 | 0.709335 | 3 | 0 | 3 |
| LRRC30 | SCN5A | 0.707554 | 3 | 0 | 3 |
For details and further investigation, click here
