| Full name: OTX2 antisense RNA 1 (head to head) | Alias Symbol: OTX2OS1 | ||
| Type: non-coding RNA | Cytoband: 14q22.3 | ||
| Entrez ID: 100309464 | HGNC ID: HGNC:43906 | Ensembl Gene: ENSG00000248550 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of OTX2-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | OTX2-AS1 | 100309464 | 1561319_at | 0.2406 | 0.3937 | |
| GSE26886 | OTX2-AS1 | 100309464 | 1561319_at | -0.0368 | 0.6873 | |
| GSE45670 | OTX2-AS1 | 100309464 | 1561319_at | 0.2760 | 0.0055 | |
| GSE53622 | OTX2-AS1 | 100309464 | 107707 | 0.2169 | 0.0068 | |
| GSE53624 | OTX2-AS1 | 100309464 | 107707 | 0.0894 | 0.3305 | |
| GSE63941 | OTX2-AS1 | 100309464 | 1561319_at | 0.0984 | 0.4171 | |
| GSE77861 | OTX2-AS1 | 100309464 | 1561319_at | -0.0059 | 0.9549 | |
| SRP133303 | OTX2-AS1 | 100309464 | RNAseq | 0.0051 | 0.9743 | |
| SRP193095 | OTX2-AS1 | 100309464 | RNAseq | 0.4249 | 0.0208 | |
| SRP219564 | OTX2-AS1 | 100309464 | RNAseq | 0.8608 | 0.0938 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by OTX2-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of OTX2-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | OTX2-AS1 | 100309464 | 8 | 3 | 19 | |
| GSE20123 | OTX2-AS1 | 100309464 | 8 | 3 | 19 | |
| GSE43470 | OTX2-AS1 | 100309464 | 9 | 2 | 32 | |
| GSE46452 | OTX2-AS1 | 100309464 | 16 | 3 | 40 | |
| GSE47630 | OTX2-AS1 | 100309464 | 11 | 10 | 19 | |
| GSE54993 | OTX2-AS1 | 100309464 | 3 | 8 | 59 | |
| GSE54994 | OTX2-AS1 | 100309464 | 19 | 4 | 30 | |
| GSE60625 | OTX2-AS1 | 100309464 | 0 | 2 | 9 | |
| GSE74703 | OTX2-AS1 | 100309464 | 8 | 2 | 26 | |
| GSE74704 | OTX2-AS1 | 100309464 | 3 | 2 | 15 |
Total number of gains: 85; Total number of losses: 39; Total Number of normals: 268.
Somatic mutations of OTX2-AS1:
Generating mutation plots.
Highly correlated genes for OTX2-AS1:
Showing all 14 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| OTX2-AS1 | RAB3B | 0.706384 | 3 | 0 | 3 |
| OTX2-AS1 | CACNA2D3 | 0.609776 | 3 | 0 | 3 |
| OTX2-AS1 | PDE6C | 0.598952 | 4 | 0 | 3 |
| OTX2-AS1 | SLC4A2 | 0.59689 | 3 | 0 | 3 |
| OTX2-AS1 | GPR182 | 0.589003 | 3 | 0 | 3 |
| OTX2-AS1 | SLC1A7 | 0.579459 | 4 | 0 | 3 |
| OTX2-AS1 | CBR1 | 0.575265 | 3 | 0 | 3 |
| OTX2-AS1 | DPH5 | 0.566635 | 3 | 0 | 3 |
| OTX2-AS1 | SNHG4 | 0.562366 | 3 | 0 | 3 |
| OTX2-AS1 | GSTM4 | 0.556033 | 3 | 0 | 3 |
| OTX2-AS1 | FAM71F1 | 0.549707 | 3 | 0 | 3 |
| OTX2-AS1 | TSSK3 | 0.528643 | 5 | 0 | 3 |
| OTX2-AS1 | SHISA7 | 0.507103 | 4 | 0 | 3 |
| OTX2-AS1 | PRODH2 | 0.50679 | 6 | 0 | 3 |
For details and further investigation, click here
