| Full name: paralemmin 3 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19p13.12 | ||
| Entrez ID: 342979 | HGNC ID: HGNC:33274 | Ensembl Gene: ENSG00000187867 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PALM3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PALM3 | 342979 | 231018_at | -0.0346 | 0.8981 | |
| GSE26886 | PALM3 | 342979 | 231018_at | 0.2503 | 0.2061 | |
| GSE45670 | PALM3 | 342979 | 231018_at | 0.0774 | 0.3783 | |
| GSE53622 | PALM3 | 342979 | 130407 | 0.1336 | 0.0873 | |
| GSE53624 | PALM3 | 342979 | 95382 | 0.0158 | 0.9161 | |
| GSE63941 | PALM3 | 342979 | 231018_at | 0.4512 | 0.5666 | |
| GSE77861 | PALM3 | 342979 | 231018_at | -0.1144 | 0.1522 | |
| GSE97050 | PALM3 | 342979 | A_33_P3258056 | -0.1698 | 0.3862 | |
| SRP219564 | PALM3 | 342979 | RNAseq | 0.5078 | 0.3681 | |
| TCGA | PALM3 | 342979 | RNAseq | -2.3986 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by PALM3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PALM3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PALM3 | 342979 | 4 | 2 | 24 | |
| GSE20123 | PALM3 | 342979 | 3 | 1 | 26 | |
| GSE43470 | PALM3 | 342979 | 2 | 6 | 35 | |
| GSE46452 | PALM3 | 342979 | 47 | 1 | 11 | |
| GSE47630 | PALM3 | 342979 | 4 | 7 | 29 | |
| GSE54993 | PALM3 | 342979 | 15 | 4 | 51 | |
| GSE54994 | PALM3 | 342979 | 6 | 13 | 34 | |
| GSE60625 | PALM3 | 342979 | 9 | 0 | 2 | |
| GSE74703 | PALM3 | 342979 | 2 | 4 | 30 | |
| GSE74704 | PALM3 | 342979 | 0 | 1 | 19 | |
| TCGA | PALM3 | 342979 | 20 | 11 | 65 |
Total number of gains: 112; Total number of losses: 50; Total Number of normals: 326.
Somatic mutations of PALM3:
Generating mutation plots.
Highly correlated genes for PALM3:
Showing top 20/421 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PALM3 | SIGLEC7 | 0.831259 | 3 | 0 | 3 |
| PALM3 | EMID1 | 0.812778 | 3 | 0 | 3 |
| PALM3 | TMEM229A | 0.799273 | 3 | 0 | 3 |
| PALM3 | ANO7 | 0.778547 | 3 | 0 | 3 |
| PALM3 | GRIK4 | 0.760274 | 3 | 0 | 3 |
| PALM3 | SLC25A47 | 0.755509 | 3 | 0 | 3 |
| PALM3 | PNPLA5 | 0.75492 | 4 | 0 | 4 |
| PALM3 | SVOPL | 0.753849 | 3 | 0 | 3 |
| PALM3 | TEKT2 | 0.752281 | 3 | 0 | 3 |
| PALM3 | C19orf73 | 0.751035 | 3 | 0 | 3 |
| PALM3 | GCLM | 0.750727 | 3 | 0 | 3 |
| PALM3 | NCR3 | 0.748519 | 3 | 0 | 3 |
| PALM3 | CLDN14 | 0.742176 | 3 | 0 | 3 |
| PALM3 | MYOZ3 | 0.741469 | 4 | 0 | 4 |
| PALM3 | CLCNKA | 0.739866 | 3 | 0 | 3 |
| PALM3 | STRC | 0.733438 | 3 | 0 | 3 |
| PALM3 | C4BPA | 0.733283 | 4 | 0 | 3 |
| PALM3 | OR2T27 | 0.729807 | 3 | 0 | 3 |
| PALM3 | TATDN3 | 0.728139 | 3 | 0 | 3 |
| PALM3 | RASL10B | 0.724669 | 4 | 0 | 4 |
For details and further investigation, click here
