| Full name: PAXBP1 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 21q22.11 | ||
| Entrez ID: 100506215 | HGNC ID: HGNC:39603 | Ensembl Gene: ENSG00000238197 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PAXBP1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PAXBP1-AS1 | 100506215 | 239407_at | -0.1435 | 0.6999 | |
| GSE26886 | PAXBP1-AS1 | 100506215 | 239407_at | 0.3614 | 0.0351 | |
| GSE45670 | PAXBP1-AS1 | 100506215 | 239407_at | -0.0694 | 0.4352 | |
| GSE53622 | PAXBP1-AS1 | 100506215 | 93868 | -0.0242 | 0.8408 | |
| GSE53624 | PAXBP1-AS1 | 100506215 | 93868 | -0.0997 | 0.4959 | |
| GSE63941 | PAXBP1-AS1 | 100506215 | 239407_at | 0.1356 | 0.6352 | |
| GSE77861 | PAXBP1-AS1 | 100506215 | 1556789_a_at | -0.2190 | 0.0114 | |
| SRP064894 | PAXBP1-AS1 | 100506215 | RNAseq | 0.1181 | 0.6437 | |
| SRP133303 | PAXBP1-AS1 | 100506215 | RNAseq | -0.0658 | 0.7014 | |
| SRP159526 | PAXBP1-AS1 | 100506215 | RNAseq | -0.1622 | 0.7288 | |
| SRP193095 | PAXBP1-AS1 | 100506215 | RNAseq | -0.0547 | 0.6311 | |
| SRP219564 | PAXBP1-AS1 | 100506215 | RNAseq | 0.4543 | 0.3113 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PAXBP1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of PAXBP1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PAXBP1-AS1 | 100506215 | 2 | 7 | 21 | |
| GSE20123 | PAXBP1-AS1 | 100506215 | 2 | 8 | 20 | |
| GSE43470 | PAXBP1-AS1 | 100506215 | 3 | 9 | 31 | |
| GSE46452 | PAXBP1-AS1 | 100506215 | 1 | 21 | 37 | |
| GSE47630 | PAXBP1-AS1 | 100506215 | 6 | 17 | 17 | |
| GSE54993 | PAXBP1-AS1 | 100506215 | 9 | 1 | 60 | |
| GSE54994 | PAXBP1-AS1 | 100506215 | 1 | 9 | 43 | |
| GSE60625 | PAXBP1-AS1 | 100506215 | 0 | 0 | 11 | |
| GSE74703 | PAXBP1-AS1 | 100506215 | 3 | 6 | 27 | |
| GSE74704 | PAXBP1-AS1 | 100506215 | 1 | 4 | 15 |
Total number of gains: 28; Total number of losses: 82; Total Number of normals: 282.
Somatic mutations of PAXBP1-AS1:
Generating mutation plots.
Highly correlated genes for PAXBP1-AS1:
Showing all 16 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PAXBP1-AS1 | RELN | 0.694902 | 3 | 0 | 3 |
| PAXBP1-AS1 | L1CAM | 0.688647 | 3 | 0 | 3 |
| PAXBP1-AS1 | AAMDC | 0.654264 | 3 | 0 | 3 |
| PAXBP1-AS1 | MSH4 | 0.642977 | 3 | 0 | 3 |
| PAXBP1-AS1 | LSM3 | 0.621475 | 3 | 0 | 3 |
| PAXBP1-AS1 | OXCT1 | 0.620997 | 3 | 0 | 3 |
| PAXBP1-AS1 | KL | 0.619523 | 4 | 0 | 3 |
| PAXBP1-AS1 | ZNF619 | 0.612369 | 3 | 0 | 3 |
| PAXBP1-AS1 | POU6F1 | 0.59963 | 3 | 0 | 3 |
| PAXBP1-AS1 | CCSER2 | 0.595941 | 3 | 0 | 3 |
| PAXBP1-AS1 | RERE | 0.561679 | 3 | 0 | 3 |
| PAXBP1-AS1 | ARIH2OS | 0.559647 | 4 | 0 | 4 |
| PAXBP1-AS1 | SEC24B-AS1 | 0.554392 | 3 | 0 | 3 |
| PAXBP1-AS1 | ZNF548 | 0.550264 | 3 | 0 | 3 |
| PAXBP1-AS1 | DGKE | 0.541977 | 3 | 0 | 3 |
| PAXBP1-AS1 | CMC1 | 0.527648 | 4 | 0 | 3 |
For details and further investigation, click here
