| Full name: PCED1B antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q13.11 | ||
| Entrez ID: 100233209 | HGNC ID: HGNC:44166 | Ensembl Gene: ENSG00000247774 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PCED1B-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PCED1B-AS1 | 100233209 | 241947_at | 0.2257 | 0.5465 | |
| GSE26886 | PCED1B-AS1 | 100233209 | 241947_at | -0.0604 | 0.6016 | |
| GSE45670 | PCED1B-AS1 | 100233209 | 241947_at | 0.0441 | 0.6130 | |
| GSE53622 | PCED1B-AS1 | 100233209 | 138695 | -0.2139 | 0.0021 | |
| GSE53624 | PCED1B-AS1 | 100233209 | 138695 | -0.8357 | 0.0000 | |
| GSE63941 | PCED1B-AS1 | 100233209 | 241947_at | 0.0266 | 0.8712 | |
| GSE77861 | PCED1B-AS1 | 100233209 | 241947_at | -0.0063 | 0.9534 | |
| SRP007169 | PCED1B-AS1 | 100233209 | RNAseq | 0.3408 | 0.6846 | |
| SRP064894 | PCED1B-AS1 | 100233209 | RNAseq | 0.5874 | 0.0580 | |
| SRP133303 | PCED1B-AS1 | 100233209 | RNAseq | 0.0683 | 0.7097 | |
| SRP159526 | PCED1B-AS1 | 100233209 | RNAseq | -0.8011 | 0.2806 | |
| SRP193095 | PCED1B-AS1 | 100233209 | RNAseq | 0.1277 | 0.3578 | |
| SRP219564 | PCED1B-AS1 | 100233209 | RNAseq | 0.5511 | 0.0872 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PCED1B-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of PCED1B-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PCED1B-AS1 | 100233209 | 7 | 1 | 22 | |
| GSE20123 | PCED1B-AS1 | 100233209 | 7 | 1 | 22 | |
| GSE43470 | PCED1B-AS1 | 100233209 | 3 | 1 | 39 | |
| GSE46452 | PCED1B-AS1 | 100233209 | 8 | 1 | 50 | |
| GSE47630 | PCED1B-AS1 | 100233209 | 11 | 2 | 27 | |
| GSE54993 | PCED1B-AS1 | 100233209 | 0 | 5 | 65 | |
| GSE54994 | PCED1B-AS1 | 100233209 | 5 | 2 | 46 | |
| GSE60625 | PCED1B-AS1 | 100233209 | 0 | 0 | 11 | |
| GSE74703 | PCED1B-AS1 | 100233209 | 3 | 1 | 32 | |
| GSE74704 | PCED1B-AS1 | 100233209 | 3 | 1 | 16 |
Total number of gains: 47; Total number of losses: 15; Total Number of normals: 330.
Somatic mutations of PCED1B-AS1:
Generating mutation plots.
Highly correlated genes for PCED1B-AS1:
Showing top 20/26 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PCED1B-AS1 | KRTAP4-1 | 0.725927 | 3 | 0 | 3 |
| PCED1B-AS1 | MORN3 | 0.715468 | 3 | 0 | 3 |
| PCED1B-AS1 | PTPN22 | 0.711636 | 3 | 0 | 3 |
| PCED1B-AS1 | VNN3 | 0.711243 | 3 | 0 | 3 |
| PCED1B-AS1 | DCTN1-AS1 | 0.685565 | 3 | 0 | 3 |
| PCED1B-AS1 | TMEM200C | 0.678334 | 3 | 0 | 3 |
| PCED1B-AS1 | GPT | 0.645193 | 4 | 0 | 3 |
| PCED1B-AS1 | BEST3 | 0.643752 | 3 | 0 | 3 |
| PCED1B-AS1 | GPR137C | 0.643385 | 3 | 0 | 3 |
| PCED1B-AS1 | SPACA3 | 0.629677 | 3 | 0 | 3 |
| PCED1B-AS1 | TRMT10B | 0.624964 | 4 | 0 | 3 |
| PCED1B-AS1 | PRSS16 | 0.621632 | 3 | 0 | 3 |
| PCED1B-AS1 | KATNAL2 | 0.614324 | 3 | 0 | 3 |
| PCED1B-AS1 | MIRLET7BHG | 0.607772 | 3 | 0 | 3 |
| PCED1B-AS1 | CARD11 | 0.59872 | 3 | 0 | 3 |
| PCED1B-AS1 | DIP2A | 0.595772 | 3 | 0 | 3 |
| PCED1B-AS1 | CCDC62 | 0.593715 | 3 | 0 | 3 |
| PCED1B-AS1 | SLC22A31 | 0.571437 | 5 | 0 | 3 |
| PCED1B-AS1 | NOBOX | 0.567449 | 3 | 0 | 3 |
| PCED1B-AS1 | QRICH2 | 0.566928 | 3 | 0 | 3 |
For details and further investigation, click here
