| Full name: transmembrane protein 200C | Alias Symbol: TTMA | ||
| Type: protein-coding gene | Cytoband: 18p11.31 | ||
| Entrez ID: 645369 | HGNC ID: HGNC:37208 | Ensembl Gene: ENSG00000206432 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TMEM200C:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMEM200C | 645369 | 229523_at | 0.1658 | 0.7891 | |
| GSE26886 | TMEM200C | 645369 | 229523_at | 0.9584 | 0.0297 | |
| GSE45670 | TMEM200C | 645369 | 229523_at | 0.0176 | 0.9307 | |
| GSE53622 | TMEM200C | 645369 | 64099 | -0.6356 | 0.0000 | |
| GSE53624 | TMEM200C | 645369 | 64099 | -0.3215 | 0.0029 | |
| GSE63941 | TMEM200C | 645369 | 229523_at | -0.8103 | 0.4284 | |
| GSE77861 | TMEM200C | 645369 | 229523_at | 0.0751 | 0.4759 | |
| GSE97050 | TMEM200C | 645369 | A_24_P933011 | -0.7427 | 0.1670 | |
| SRP133303 | TMEM200C | 645369 | RNAseq | 0.9014 | 0.0377 | |
| SRP159526 | TMEM200C | 645369 | RNAseq | 2.4148 | 0.0022 | |
| TCGA | TMEM200C | 645369 | RNAseq | 0.6392 | 0.1069 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TMEM200C expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TMEM200C:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMEM200C | 645369 | 7 | 3 | 20 | |
| GSE20123 | TMEM200C | 645369 | 7 | 3 | 20 | |
| GSE43470 | TMEM200C | 645369 | 4 | 5 | 34 | |
| GSE46452 | TMEM200C | 645369 | 3 | 21 | 35 | |
| GSE47630 | TMEM200C | 645369 | 7 | 17 | 16 | |
| GSE54993 | TMEM200C | 645369 | 6 | 3 | 61 | |
| GSE54994 | TMEM200C | 645369 | 10 | 8 | 35 | |
| GSE60625 | TMEM200C | 645369 | 0 | 4 | 7 | |
| GSE74703 | TMEM200C | 645369 | 3 | 3 | 30 | |
| GSE74704 | TMEM200C | 645369 | 5 | 2 | 13 | |
| TCGA | TMEM200C | 645369 | 33 | 20 | 43 |
Total number of gains: 85; Total number of losses: 89; Total Number of normals: 314.
Somatic mutations of TMEM200C:
Generating mutation plots.
Highly correlated genes for TMEM200C:
Showing top 20/88 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMEM200C | VNN3 | 0.759138 | 3 | 0 | 3 |
| TMEM200C | STOX1 | 0.730339 | 3 | 0 | 3 |
| TMEM200C | CCDC88C | 0.730243 | 4 | 0 | 4 |
| TMEM200C | C2orf73 | 0.71375 | 3 | 0 | 3 |
| TMEM200C | ATRNL1 | 0.706074 | 4 | 0 | 4 |
| TMEM200C | ATP2A3 | 0.70395 | 3 | 0 | 3 |
| TMEM200C | BET1L | 0.686227 | 5 | 0 | 5 |
| TMEM200C | PHF21B | 0.678428 | 4 | 0 | 4 |
| TMEM200C | PCED1B-AS1 | 0.678334 | 3 | 0 | 3 |
| TMEM200C | PLVAP | 0.665089 | 3 | 0 | 3 |
| TMEM200C | CASC15 | 0.664772 | 5 | 0 | 5 |
| TMEM200C | CHRDL1 | 0.662963 | 4 | 0 | 3 |
| TMEM200C | CLDN19 | 0.652071 | 4 | 0 | 3 |
| TMEM200C | FCER2 | 0.650928 | 3 | 0 | 3 |
| TMEM200C | KIRREL2 | 0.639946 | 3 | 0 | 3 |
| TMEM200C | MPDZ | 0.636932 | 3 | 0 | 3 |
| TMEM200C | CCL16 | 0.628468 | 3 | 0 | 3 |
| TMEM200C | SFTPA2 | 0.623197 | 3 | 0 | 3 |
| TMEM200C | TESPA1 | 0.618387 | 3 | 0 | 3 |
| TMEM200C | CCDC78 | 0.615753 | 6 | 0 | 3 |
For details and further investigation, click here
