| Full name: psoriasis susceptibility 1 candidate 3 | Alias Symbol: NCRNA00196 | ||
| Type: non-coding RNA | Cytoband: 6p21.33 | ||
| Entrez ID: 100130889 | HGNC ID: HGNC:17203 | Ensembl Gene: ENSG00000204528 | OMIM ID: |
Expression of PSORS1C3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PSORS1C3 | 100130889 | 238997_at | 0.2567 | 0.6552 | |
| GSE26886 | PSORS1C3 | 100130889 | 238997_at | 0.2645 | 0.0277 | |
| GSE45670 | PSORS1C3 | 100130889 | 238997_at | 0.1461 | 0.5919 | |
| GSE53622 | PSORS1C3 | 100130889 | 50833 | 0.0224 | 0.9199 | |
| GSE53624 | PSORS1C3 | 100130889 | 50833 | 0.4474 | 0.0117 | |
| GSE63941 | PSORS1C3 | 100130889 | 238997_at | 0.1871 | 0.6272 | |
| GSE77861 | PSORS1C3 | 100130889 | 238997_at | -0.0575 | 0.7373 | |
| SRP133303 | PSORS1C3 | 100130889 | RNAseq | 0.1494 | 0.6695 | |
| TCGA | PSORS1C3 | 100130889 | RNAseq | -1.8377 | 0.0039 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by PSORS1C3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PSORS1C3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PSORS1C3 | 100130889 | 5 | 1 | 24 | |
| GSE20123 | PSORS1C3 | 100130889 | 5 | 1 | 24 | |
| GSE43470 | PSORS1C3 | 100130889 | 5 | 1 | 37 | |
| GSE46452 | PSORS1C3 | 100130889 | 1 | 10 | 48 | |
| GSE47630 | PSORS1C3 | 100130889 | 7 | 3 | 30 | |
| GSE54993 | PSORS1C3 | 100130889 | 2 | 1 | 67 | |
| GSE54994 | PSORS1C3 | 100130889 | 11 | 4 | 38 | |
| GSE60625 | PSORS1C3 | 100130889 | 0 | 1 | 10 | |
| GSE74703 | PSORS1C3 | 100130889 | 5 | 0 | 31 | |
| GSE74704 | PSORS1C3 | 100130889 | 2 | 0 | 18 | |
| TCGA | PSORS1C3 | 100130889 | 16 | 16 | 64 |
Total number of gains: 59; Total number of losses: 38; Total Number of normals: 391.
Somatic mutations of PSORS1C3:
Generating mutation plots.
Highly correlated genes for PSORS1C3:
Showing all 16 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PSORS1C3 | EXOC3L4 | 0.63664 | 3 | 0 | 3 |
| PSORS1C3 | ENTPD2 | 0.633996 | 3 | 0 | 3 |
| PSORS1C3 | RARRES1 | 0.631538 | 3 | 0 | 3 |
| PSORS1C3 | MYO7A | 0.618328 | 3 | 0 | 3 |
| PSORS1C3 | RBFOX1 | 0.599981 | 3 | 0 | 3 |
| PSORS1C3 | POU5F1B | 0.597862 | 4 | 0 | 3 |
| PSORS1C3 | APOC2 | 0.595906 | 3 | 0 | 3 |
| PSORS1C3 | LRPAP1 | 0.58116 | 3 | 0 | 3 |
| PSORS1C3 | RSPO4 | 0.579192 | 3 | 0 | 3 |
| PSORS1C3 | GABRR2 | 0.56625 | 3 | 0 | 3 |
| PSORS1C3 | IQCC | 0.566108 | 4 | 0 | 3 |
| PSORS1C3 | NXPH4 | 0.561414 | 3 | 0 | 3 |
| PSORS1C3 | ORM1 | 0.557357 | 4 | 0 | 3 |
| PSORS1C3 | CPAMD8 | 0.548813 | 3 | 0 | 3 |
| PSORS1C3 | SHARPIN | 0.535388 | 4 | 0 | 3 |
| PSORS1C3 | CA9 | 0.531268 | 4 | 0 | 3 |
For details and further investigation, click here
