| Full name: RNA binding fox-1 homolog 1 | Alias Symbol: A2BP1|FOX-1|HRNBP1 | ||
| Type: protein-coding gene | Cytoband: 16p13.3 | ||
| Entrez ID: 54715 | HGNC ID: HGNC:18222 | Ensembl Gene: ENSG00000078328 | OMIM ID: 605104 |
| Drug and gene relationship at DGIdb | |||
Expression of RBFOX1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RBFOX1 | 54715 | 235070_at | 0.2341 | 0.2324 | |
| GSE20347 | RBFOX1 | 54715 | 221217_s_at | -0.0443 | 0.4763 | |
| GSE23400 | RBFOX1 | 54715 | 221217_s_at | -0.0546 | 0.0486 | |
| GSE26886 | RBFOX1 | 54715 | 235070_at | 0.1475 | 0.1024 | |
| GSE29001 | RBFOX1 | 54715 | 221217_s_at | 0.0388 | 0.8301 | |
| GSE38129 | RBFOX1 | 54715 | 221217_s_at | -0.1602 | 0.0075 | |
| GSE45670 | RBFOX1 | 54715 | 235070_at | 0.0380 | 0.6873 | |
| GSE53622 | RBFOX1 | 54715 | 83458 | 0.1988 | 0.1999 | |
| GSE53624 | RBFOX1 | 54715 | 83458 | 0.3966 | 0.0000 | |
| GSE63941 | RBFOX1 | 54715 | 235070_at | 0.1606 | 0.2167 | |
| GSE77861 | RBFOX1 | 54715 | 235070_at | 0.0302 | 0.8037 | |
| GSE97050 | RBFOX1 | 54715 | A_24_P147242 | -0.6123 | 0.2966 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RBFOX1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RBFOX1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RBFOX1 | 54715 | 5 | 4 | 21 | |
| GSE20123 | RBFOX1 | 54715 | 5 | 3 | 22 | |
| GSE43470 | RBFOX1 | 54715 | 3 | 2 | 38 | |
| GSE46452 | RBFOX1 | 54715 | 38 | 1 | 20 | |
| GSE47630 | RBFOX1 | 54715 | 13 | 6 | 21 | |
| GSE54993 | RBFOX1 | 54715 | 3 | 5 | 62 | |
| GSE54994 | RBFOX1 | 54715 | 5 | 9 | 39 | |
| GSE60625 | RBFOX1 | 54715 | 4 | 0 | 7 | |
| GSE74703 | RBFOX1 | 54715 | 3 | 2 | 31 | |
| GSE74704 | RBFOX1 | 54715 | 3 | 2 | 15 | |
| TCGA | RBFOX1 | 54715 | 21 | 14 | 61 |
Total number of gains: 103; Total number of losses: 48; Total Number of normals: 337.
Somatic mutations of RBFOX1:
Generating mutation plots.
Highly correlated genes for RBFOX1:
Showing top 20/191 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RBFOX1 | KCNG3 | 0.687248 | 3 | 0 | 3 |
| RBFOX1 | DUSP15 | 0.648302 | 3 | 0 | 3 |
| RBFOX1 | RGS16 | 0.636635 | 3 | 0 | 3 |
| RBFOX1 | MEX3A | 0.636148 | 3 | 0 | 3 |
| RBFOX1 | TNK2 | 0.634493 | 4 | 0 | 3 |
| RBFOX1 | CFC1 | 0.627607 | 4 | 0 | 4 |
| RBFOX1 | FBXO44 | 0.622478 | 4 | 0 | 3 |
| RBFOX1 | TFEB | 0.620726 | 4 | 0 | 4 |
| RBFOX1 | IQCC | 0.610303 | 4 | 0 | 3 |
| RBFOX1 | ZNF135 | 0.607334 | 3 | 0 | 3 |
| RBFOX1 | NANOG | 0.605105 | 4 | 0 | 3 |
| RBFOX1 | RFPL3S | 0.602701 | 3 | 0 | 3 |
| RBFOX1 | SFXN5 | 0.602465 | 3 | 0 | 3 |
| RBFOX1 | PRPH | 0.602026 | 5 | 0 | 5 |
| RBFOX1 | HSD3B1 | 0.601891 | 4 | 0 | 3 |
| RBFOX1 | PSORS1C3 | 0.599981 | 3 | 0 | 3 |
| RBFOX1 | STX1A | 0.597283 | 4 | 0 | 3 |
| RBFOX1 | PPP2R2B | 0.59391 | 4 | 0 | 4 |
| RBFOX1 | UPB1 | 0.590863 | 7 | 0 | 7 |
| RBFOX1 | DOHH | 0.59029 | 4 | 0 | 3 |
For details and further investigation, click here
